Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VSX2P58304 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
VSX2P58304 RNU6-338P-201ENST00000383888 105 ntBASIC1.29□□□□□ -2.2
VSX2P58304 RNU6-203P-201ENST00000384038 104 ntBASIC1.29□□□□□ -2.2
VSX2P58304 RNU6-517P-201ENST00000384362 110 ntBASIC1.29□□□□□ -2.2
VSX2P58304 SDAD1P3-201ENST00000427380 333 ntBASIC1.29□□□□□ -2.2
VSX2P58304 AL606489.2-201ENST00000433886 234 ntBASIC1.29□□□□□ -2.2
VSX2P58304 AL121601.2-201ENST00000438019 707 ntBASIC1.29□□□□□ -2.2
VSX2P58304 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VSX2P58304 HSPE1P24-201ENST00000450782 238 ntBASIC1.29□□□□□ -2.2
VSX2P58304 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.29□□□□□ -2.2
VSX2P58304 RNU1-131P-201ENST00000458943 161 ntBASIC1.29□□□□□ -2.2
VSX2P58304 AC132942.1-201ENST00000486753 483 ntBASIC1.29□□□□□ -2.2
VSX2P58304 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.29□□□□□ -2.2
VSX2P58304 OSBPL9P5-201ENST00000542581 171 ntBASIC1.29□□□□□ -2.2
VSX2P58304 EIF4A1P12-201ENST00000551910 141 ntBASIC1.29□□□□□ -2.2
VSX2P58304 AL160236.1-201ENST00000556317 195 ntBASIC1.29□□□□□ -2.2
VSX2P58304 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.29□□□□□ -2.2
VSX2P58304 MIR4424-201ENST00000585257 86 ntBASIC1.29□□□□□ -2.2
VSX2P58304 AC068790.2-201ENST00000602601 557 ntBASIC1.29□□□□□ -2.2
VSX2P58304 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VSX2P58304 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
VSX2P58304 MTND4P14-201ENST00000435799 1354 ntBASIC1.29□□□□□ -2.2
VSX2P58304 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VSX2P58304 SNORA32.2-201ENST00000384049 122 ntBASIC1.28□□□□□ -2.2
VSX2P58304 SNORD116-8-201ENST00000384365 95 ntBASIC1.28□□□□□ -2.2
VSX2P58304 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
VSX2P58304 RNA5SP219-201ENST00000390940 113 ntBASIC1.28□□□□□ -2.2
VSX2P58304 AP000275.1-201ENST00000411943 390 ntBASIC1.28□□□□□ -2.2
VSX2P58304 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.28□□□□□ -2.2
VSX2P58304 MTCO1P44-201ENST00000441935 243 ntBASIC1.28□□□□□ -2.2
VSX2P58304 snoU13.6-201ENST00000458785 104 ntBASIC1.28□□□□□ -2.2
VSX2P58304 RNU7-63P-201ENST00000459054 62 ntBASIC1.28□□□□□ -2.2
VSX2P58304 AL163973.1-201ENST00000484753 577 ntBASIC1.28□□□□□ -2.2
VSX2P58304 AC016632.1-201ENST00000503994 196 ntBASIC1.28□□□□□ -2.2
VSX2P58304 AP005597.4-201ENST00000526762 229 ntBASIC1.28□□□□□ -2.2
VSX2P58304 AL118558.2-201ENST00000556294 238 ntBASIC1.28□□□□□ -2.2
VSX2P58304 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.28□□□□□ -2.2
VSX2P58304 AC005786.1-201ENST00000588553 154 ntBASIC1.28□□□□□ -2.2
VSX2P58304 Z99497.2-201ENST00000603634 310 ntBASIC1.28□□□□□ -2.2
VSX2P58304 AL356157.2-201ENST00000605122 111 ntBASIC1.28□□□□□ -2.2
VSX2P58304 AC064836.2-201ENST00000609491 462 ntBASIC1.28□□□□□ -2.2
VSX2P58304 AC007684.1-201ENST00000609671 477 ntBASIC1.28□□□□□ -2.2
VSX2P58304 AC109347.2-201ENST00000610220 349 ntBASIC1.28□□□□□ -2.2
VSX2P58304 U2.17-201ENST00000611454 95 ntBASIC1.28□□□□□ -2.2
VSX2P58304 MIR8070-201ENST00000616510 88 ntBASIC1.28□□□□□ -2.2
VSX2P58304 Z69908.1-201ENST00000622603 247 ntBASIC1.28□□□□□ -2.2
VSX2P58304 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
VSX2P58304 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.28□□□□□ -2.2
VSX2P58304 MTND5P9-201ENST00000503854 1755 ntBASIC1.28□□□□□ -2.2
VSX2P58304 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.27□□□□□ -2.21
VSX2P58304 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VSX2P58304 AC092268.1-201ENST00000342691 405 ntBASIC1.27□□□□□ -2.21
VSX2P58304 RNU6-392P-201ENST00000364926 101 ntBASIC1.27□□□□□ -2.21
VSX2P58304 Y_RNA.359-201ENST00000365498 102 ntBASIC1.27□□□□□ -2.21
VSX2P58304 RNU6-438P-201ENST00000365561 103 ntBASIC1.27□□□□□ -2.21
VSX2P58304 RNU6-1103P-201ENST00000384150 107 ntBASIC1.27□□□□□ -2.21
VSX2P58304 MIR30A-201ENST00000385092 71 ntBASIC1.27□□□□□ -2.21
VSX2P58304 MIR549A-201ENST00000385268 96 ntBASIC1.27□□□□□ -2.21
VSX2P58304 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.27□□□□□ -2.21
VSX2P58304 AL663109.1-201ENST00000411498 844 ntBASIC1.27□□□□□ -2.21
VSX2P58304 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.27□□□□□ -2.21
VSX2P58304 NCOR1P3-201ENST00000420479 303 ntBASIC1.27□□□□□ -2.21
VSX2P58304 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.27□□□□□ -2.21
VSX2P58304 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
VSX2P58304 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.27□□□□□ -2.21
VSX2P58304 RPS29P23-201ENST00000458635 123 ntBASIC1.27□□□□□ -2.21
VSX2P58304 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
VSX2P58304 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.27□□□□□ -2.21
VSX2P58304 MTCYBP18-201ENST00000501056 747 ntBASIC1.27□□□□□ -2.21
VSX2P58304 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.27□□□□□ -2.21
VSX2P58304 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.27□□□□□ -2.21
VSX2P58304 SNORA44.1-201ENST00000517031 108 ntBASIC1.27□□□□□ -2.21
VSX2P58304 MTND4P7-201ENST00000523876 130 ntBASIC1.27□□□□□ -2.21
VSX2P58304 AP003033.1-201ENST00000527244 415 ntBASIC1.27□□□□□ -2.21
VSX2P58304 DEFB131C-201ENST00000528817 165 ntBASIC1.27□□□□□ -2.21
VSX2P58304 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.27□□□□□ -2.21
VSX2P58304 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.27□□□□□ -2.21
VSX2P58304 CYP4A27P-201ENST00000567218 190 ntBASIC1.27□□□□□ -2.21
VSX2P58304 SNORA77B-201ENST00000578179 125 ntBASIC1.27□□□□□ -2.21
VSX2P58304 PRR13P7-201ENST00000605538 430 ntBASIC1.27□□□□□ -2.21
VSX2P58304 uc_338.34-201ENST00000617467 174 ntBASIC1.27□□□□□ -2.21
VSX2P58304 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.27□□□□□ -2.21
VSX2P58304 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.27□□□□□ -2.21
VSX2P58304 AC005609.4-201ENST00000625071 447 ntBASIC1.27□□□□□ -2.21
VSX2P58304 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
VSX2P58304 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.26□□□□□ -2.21
VSX2P58304 RNU6-545P-201ENST00000362681 104 ntBASIC1.26□□□□□ -2.21
VSX2P58304 RNU6-862P-201ENST00000362804 105 ntBASIC1.26□□□□□ -2.21
VSX2P58304 MIR208B-201ENST00000401172 77 ntBASIC1.26□□□□□ -2.21
VSX2P58304 MIR1287-201ENST00000408492 90 ntBASIC1.26□□□□□ -2.21
VSX2P58304 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.26□□□□□ -2.21
VSX2P58304 RPL21P111-201ENST00000418453 477 ntBASIC1.26□□□□□ -2.21
VSX2P58304 AC012306.1-201ENST00000423267 114 ntBASIC1.26□□□□□ -2.21
VSX2P58304 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.26□□□□□ -2.21
VSX2P58304 MTCO2P3-201ENST00000442543 421 ntBASIC1.26□□□□□ -2.21
VSX2P58304 RNU6-956P-201ENST00000458868 103 ntBASIC1.26□□□□□ -2.21
VSX2P58304 RPS29P27-201ENST00000463711 170 ntBASIC1.26□□□□□ -2.21
VSX2P58304 AC010531.2-201ENST00000465012 153 ntBASIC1.26□□□□□ -2.21
VSX2P58304 MTCO3P38-201ENST00000468910 766 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms