Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 snoU13.6-201ENST00000458785 104 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 RNU6-1208P-201ENST00000459588 107 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.48□□□□□ -2.17
PKNOX1P55347 AC010409.1-201ENST00000487382 476 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 AC025465.4-201ENST00000513422 638 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 Y_RNA.675-201ENST00000516389 149 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.48□□□□□ -2.17
PKNOX1P55347 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.48□□□□□ -2.17
PKNOX1P55347 SUB1P4-201ENST00000566062 339 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 AC005786.1-201ENST00000588553 154 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 AL357078.3-201ENST00000607528 618 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.48□□□□□ -2.17
PKNOX1P55347 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
PKNOX1P55347 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.48□□□□□ -2.17
PKNOX1P55347 MTND5P9-201ENST00000503854 1755 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 MIR126-201ENST00000362291 85 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 RNU6-661P-201ENST00000362409 107 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 RNU6-227P-201ENST00000362865 103 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 SNORD31B-201ENST00000364977 69 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 MIR30A-201ENST00000385092 71 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 MIR23A-201ENST00000385245 73 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 RNU6-1106P-201ENST00000390845 107 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 MTCO3P46-201ENST00000425787 232 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 MTND3P9-201ENST00000429526 346 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.47□□□□□ -2.17
PKNOX1P55347 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.47□□□□□ -2.17
PKNOX1P55347 AC016925.1-201ENST00000458303 298 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 RNU7-14P-201ENST00000459331 62 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 SNORA19.2-201ENST00000516013 114 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 RNU5F-4P-201ENST00000516581 114 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 SNORD60.2-201ENST00000516883 86 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 SCOCP1-201ENST00000554676 349 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.47□□□□□ -2.17
PKNOX1P55347 AC090517.1-201ENST00000569307 266 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 FAM157A-202ENST00000615155 405 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 AL136221.1-201ENST00000621449 509 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 AL359880.1-201ENST00000621879 266 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 AC124864.2-201ENST00000624736 186 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 OR5AK4P-201ENST00000635912 903 ntBASIC1.47□□□□□ -2.17
PKNOX1P55347 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PKNOX1P55347 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PKNOX1P55347 RNU6-522P-201ENST00000364497 107 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 RNU6-1317P-201ENST00000364582 104 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 RNU6-439P-201ENST00000384188 106 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 RNU6-1042P-201ENST00000384204 107 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 Y_RNA.481-201ENST00000384373 102 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.46□□□□□ -2.18
PKNOX1P55347 MTCO1P44-201ENST00000441935 243 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 AC007677.1-201ENST00000445757 515 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 SRRM1P2-201ENST00000464531 1192 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 FO393415.2-201ENST00000480085 343 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 AC091885.1-201ENST00000506658 268 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 AC092436.3-201ENST00000511788 257 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 SNORA31.17-201ENST00000516953 127 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.46□□□□□ -2.18
PKNOX1P55347 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.46□□□□□ -2.18
PKNOX1P55347 AL157687.1-201ENST00000554853 619 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 AC064807.4-201ENST00000607201 407 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.46□□□□□ -2.18
PKNOX1P55347 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.46□□□□□ -2.18
PKNOX1P55347 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.46□□□□□ -2.18
PKNOX1P55347 RNU5B-2P-201ENST00000363036 113 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 RNU6-1085P-201ENST00000363576 107 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 RNU6-438P-201ENST00000365561 103 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.45□□□□□ -2.18
PKNOX1P55347 SNORA29-201ENST00000384183 140 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 RNU6-780P-201ENST00000391030 104 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
PKNOX1P55347 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 AL359672.1-201ENST00000442302 409 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.45□□□□□ -2.18
PKNOX1P55347 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.45□□□□□ -2.18
PKNOX1P55347 HMGN2P23-201ENST00000456759 269 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 AC010531.2-201ENST00000465012 153 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 RPL9P9-202ENST00000466501 579 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 AC097473.1-201ENST00000508142 408 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.45□□□□□ -2.18
PKNOX1P55347 Y_RNA.693-201ENST00000516641 110 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 AC016256.1-201ENST00000547971 354 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.45□□□□□ -2.18
PKNOX1P55347 NBR2-204ENST00000587322 63 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.45□□□□□ -2.18
PKNOX1P55347 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.45□□□□□ -2.18
PKNOX1P55347 FER-210ENST00000628534 558 ntTSL 5 BASIC1.45□□□□□ -2.18
PKNOX1P55347 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
PKNOX1P55347 AC121333.1-201ENST00000567488 2709 ntBASIC1.44□□□□□ -2.18
PKNOX1P55347 RNU1-42P-201ENST00000364033 160 ntBASIC1.44□□□□□ -2.18
PKNOX1P55347 SNORA18.2-201ENST00000383865 132 ntBASIC1.44□□□□□ -2.18
PKNOX1P55347 RNU6-1093P-201ENST00000391194 107 ntBASIC1.44□□□□□ -2.18
PKNOX1P55347 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
PKNOX1P55347 RNU2-16P-201ENST00000410712 136 ntBASIC1.44□□□□□ -2.18
PKNOX1P55347 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.44□□□□□ -2.18
PKNOX1P55347 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.44□□□□□ -2.18
PKNOX1P55347 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.44□□□□□ -2.18
PKNOX1P55347 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
PKNOX1P55347 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.44□□□□□ -2.18
PKNOX1P55347 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.44□□□□□ -2.18
PKNOX1P55347 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.44□□□□□ -2.18
PKNOX1P55347 CTHRC1P1-201ENST00000605383 469 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms