Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC073648.5-201ENST00000603502 305 ntBASIC1.45□□□□□ -2.18
CDH4P55283 PCGEM1.1-201ENST00000613431 131 ntBASIC1.45□□□□□ -2.18
CDH4P55283 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
CDH4P55283 MIR340-201ENST00000362125 95 ntBASIC1.44□□□□□ -2.18
CDH4P55283 Y_RNA.67-201ENST00000362870 100 ntBASIC1.44□□□□□ -2.18
CDH4P55283 RNU6-414P-201ENST00000363705 104 ntBASIC1.44□□□□□ -2.18
CDH4P55283 Y_RNA.582-201ENST00000391023 95 ntBASIC1.44□□□□□ -2.18
CDH4P55283 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.44□□□□□ -2.18
CDH4P55283 AL133396.1-201ENST00000432048 687 ntBASIC1.44□□□□□ -2.18
CDH4P55283 AC002486.1-201ENST00000435098 391 ntBASIC1.44□□□□□ -2.18
CDH4P55283 RNU7-14P-201ENST00000459331 62 ntBASIC1.44□□□□□ -2.18
CDH4P55283 AC087477.1-201ENST00000465747 340 ntBASIC1.44□□□□□ -2.18
CDH4P55283 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.44□□□□□ -2.18
CDH4P55283 AL163973.1-201ENST00000484753 577 ntBASIC1.44□□□□□ -2.18
CDH4P55283 AC091874.1-201ENST00000511402 339 ntBASIC1.44□□□□□ -2.18
CDH4P55283 RN7SKP298-201ENST00000515950 94 ntBASIC1.44□□□□□ -2.18
CDH4P55283 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.44□□□□□ -2.18
CDH4P55283 RNU6-1098P-201ENST00000516772 96 ntBASIC1.44□□□□□ -2.18
CDH4P55283 AC069113.1-201ENST00000517763 267 ntBASIC1.44□□□□□ -2.18
CDH4P55283 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.44□□□□□ -2.18
CDH4P55283 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.44□□□□□ -2.18
CDH4P55283 AC090115.3-201ENST00000553218 849 ntBASIC1.44□□□□□ -2.18
CDH4P55283 HMGB1P33-201ENST00000563485 527 ntBASIC1.44□□□□□ -2.18
CDH4P55283 AP001485.1-201ENST00000604799 199 ntBASIC1.44□□□□□ -2.18
CDH4P55283 RN7SKP299-201ENST00000606679 301 ntBASIC1.44□□□□□ -2.18
CDH4P55283 AC007684.1-201ENST00000609671 477 ntBASIC1.44□□□□□ -2.18
CDH4P55283 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CDH4P55283 Y_RNA.1-201ENST00000352915 104 ntBASIC1.43□□□□□ -2.18
CDH4P55283 SNORD116-9-201ENST00000384000 95 ntBASIC1.43□□□□□ -2.18
CDH4P55283 SNORD116-3-201ENST00000384287 95 ntBASIC1.43□□□□□ -2.18
CDH4P55283 RNU6-378P-201ENST00000384324 107 ntBASIC1.43□□□□□ -2.18
CDH4P55283 SNORD116-7-201ENST00000384404 95 ntBASIC1.43□□□□□ -2.18
CDH4P55283 SNORD116-5-201ENST00000384462 95 ntBASIC1.43□□□□□ -2.18
CDH4P55283 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.43□□□□□ -2.18
CDH4P55283 SNORA12.2-201ENST00000391040 156 ntBASIC1.43□□□□□ -2.18
CDH4P55283 SNORA26.3-201ENST00000391119 136 ntBASIC1.43□□□□□ -2.18
CDH4P55283 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CDH4P55283 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.43□□□□□ -2.18
CDH4P55283 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.43□□□□□ -2.18
CDH4P55283 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.43□□□□□ -2.18
CDH4P55283 AL606489.2-201ENST00000433886 234 ntBASIC1.43□□□□□ -2.18
CDH4P55283 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.43□□□□□ -2.18
CDH4P55283 TOMM22P6-201ENST00000465035 409 ntBASIC1.43□□□□□ -2.18
CDH4P55283 RPS3AP17-201ENST00000472594 777 ntBASIC1.43□□□□□ -2.18
CDH4P55283 AC010493.1-201ENST00000513479 292 ntBASIC1.43□□□□□ -2.18
CDH4P55283 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.43□□□□□ -2.18
CDH4P55283 EIF4A1P12-201ENST00000551910 141 ntBASIC1.43□□□□□ -2.18
CDH4P55283 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.43□□□□□ -2.18
CDH4P55283 MIR4421-201ENST00000578133 69 ntBASIC1.43□□□□□ -2.18
CDH4P55283 Z98751.3-201ENST00000604447 521 ntBASIC1.43□□□□□ -2.18
CDH4P55283 HULC.1-201ENST00000612720 240 ntBASIC1.43□□□□□ -2.18
CDH4P55283 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.43□□□□□ -2.18
CDH4P55283 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.43□□□□□ -2.18
CDH4P55283 AL354950.2-201ENST00000617939 290 ntBASIC1.43□□□□□ -2.18
CDH4P55283 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.42□□□□□ -2.18
CDH4P55283 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDH4P55283 MTND5P9-201ENST00000503854 1755 ntBASIC1.42□□□□□ -2.18
CDH4P55283 Y_RNA.255-201ENST00000364581 97 ntBASIC1.42□□□□□ -2.18
CDH4P55283 SNORA36A-201ENST00000384221 132 ntBASIC1.42□□□□□ -2.18
CDH4P55283 SNORD116-1-201ENST00000384335 95 ntBASIC1.42□□□□□ -2.18
CDH4P55283 RNU6-1119P-201ENST00000384349 108 ntBASIC1.42□□□□□ -2.18
CDH4P55283 RNU6-1026P-201ENST00000384465 108 ntBASIC1.42□□□□□ -2.18
CDH4P55283 MIR1267-201ENST00000408723 78 ntBASIC1.42□□□□□ -2.18
CDH4P55283 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
CDH4P55283 RPL23AP95-201ENST00000426806 265 ntBASIC1.42□□□□□ -2.18
CDH4P55283 HSPE1P24-201ENST00000450782 238 ntBASIC1.42□□□□□ -2.18
CDH4P55283 AC009474.2-201ENST00000451383 136 ntBASIC1.42□□□□□ -2.18
CDH4P55283 MTCO2P18-201ENST00000457151 658 ntBASIC1.42□□□□□ -2.18
CDH4P55283 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.42□□□□□ -2.18
CDH4P55283 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH4P55283 AC114801.2-201ENST00000503825 781 ntBASIC1.42□□□□□ -2.18
CDH4P55283 SNORA40.12-201ENST00000516329 111 ntBASIC1.42□□□□□ -2.18
CDH4P55283 RNU6-567P-201ENST00000516746 107 ntBASIC1.42□□□□□ -2.18
CDH4P55283 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH4P55283 AC021231.3-201ENST00000558497 370 ntBASIC1.42□□□□□ -2.18
CDH4P55283 SUB1P3-201ENST00000564581 315 ntBASIC1.42□□□□□ -2.18
CDH4P55283 CYP4A27P-201ENST00000567218 190 ntBASIC1.42□□□□□ -2.18
CDH4P55283 MIR3941-201ENST00000582572 103 ntBASIC1.42□□□□□ -2.18
CDH4P55283 AC087683.1-201ENST00000591187 441 ntBASIC1.42□□□□□ -2.18
CDH4P55283 AP001836.1-201ENST00000604675 523 ntBASIC1.42□□□□□ -2.18
CDH4P55283 AC017083.3-201ENST00000609955 700 ntBASIC1.42□□□□□ -2.18
CDH4P55283 AC083806.3-201ENST00000614016 455 ntBASIC1.42□□□□□ -2.18
CDH4P55283 uc_338.34-201ENST00000617467 174 ntBASIC1.42□□□□□ -2.18
CDH4P55283 AL450472.1-202ENST00000637286 180 ntBASIC1.42□□□□□ -2.18
CDH4P55283 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.42□□□□□ -2.18
CDH4P55283 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
CDH4P55283 Y_RNA.296-201ENST00000364930 108 ntBASIC1.41□□□□□ -2.18
CDH4P55283 RNU6-296P-201ENST00000384608 107 ntBASIC1.41□□□□□ -2.18
CDH4P55283 MIR208B-201ENST00000401172 77 ntBASIC1.41□□□□□ -2.18
CDH4P55283 VN1R108P-201ENST00000431580 830 ntBASIC1.41□□□□□ -2.18
CDH4P55283 MTCO1P44-201ENST00000441935 243 ntBASIC1.41□□□□□ -2.18
CDH4P55283 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.41□□□□□ -2.18
CDH4P55283 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.41□□□□□ -2.18
CDH4P55283 AL160236.1-201ENST00000556317 195 ntBASIC1.41□□□□□ -2.18
CDH4P55283 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.41□□□□□ -2.18
CDH4P55283 AC090517.1-201ENST00000569307 266 ntBASIC1.41□□□□□ -2.18
CDH4P55283 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.41□□□□□ -2.18
CDH4P55283 MIR4422-201ENST00000581938 83 ntBASIC1.41□□□□□ -2.18
CDH4P55283 RNU6-85P-201ENST00000605989 107 ntBASIC1.41□□□□□ -2.18
CDH4P55283 AP001330.5-201ENST00000607176 411 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms