Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUBP1P53384 RNA5SP38-201ENST00000410750 119 ntBASIC5□□□□□ -1.61
NUBP1P53384 AL022718.1-201ENST00000412004 84 ntBASIC5□□□□□ -1.61
NUBP1P53384 AC123900.1-201ENST00000420390 96 ntBASIC5□□□□□ -1.61
NUBP1P53384 AC244505.4-201ENST00000434905 287 ntBASIC5□□□□□ -1.61
NUBP1P53384 RPL23AP46-201ENST00000438548 490 ntBASIC5□□□□□ -1.61
NUBP1P53384 SSXP5-201ENST00000443473 287 ntBASIC5□□□□□ -1.61
NUBP1P53384 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUBP1P53384 AC002546.1-201ENST00000588041 2504 ntBASIC5□□□□□ -1.61
NUBP1P53384 AL121839.2-201ENST00000565058 6943 ntBASIC5□□□□□ -1.61
NUBP1P53384 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5□□□□□ -1.61
NUBP1P53384 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUBP1P53384 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUBP1P53384 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
NUBP1P53384 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUBP1P53384 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.99□□□□□ -1.61
NUBP1P53384 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
NUBP1P53384 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUBP1P53384 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.99□□□□□ -1.61
NUBP1P53384 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUBP1P53384 Y_RNA.299-201ENST00000364973 94 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NUBP1P53384 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NUBP1P53384 SNORA11.1-201ENST00000408133 129 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 RNU6-887P-201ENST00000410660 100 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 AC107083.1-201ENST00000439643 279 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 LINC02210-201ENST00000444561 288 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.99□□□□□ -1.61
NUBP1P53384 RN7SL303P-201ENST00000469773 251 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 AC106707.2-201ENST00000484182 374 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 RPS23P4-201ENST00000487908 423 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 SCARNA20.4-201ENST00000516969 131 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 AP002004.2-201ENST00000531656 154 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 MIR4444-1-201ENST00000581696 74 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 MIR4444-2-201ENST00000584390 74 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 AC078899.2-201ENST00000595282 212 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 MIR6075-201ENST00000620782 95 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUBP1P53384 AC064859.1-201ENST00000624741 174 ntBASIC4.99□□□□□ -1.61
NUBP1P53384 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.99□□□□□ -1.61
NUBP1P53384 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUBP1P53384 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUBP1P53384 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUBP1P53384 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.99□□□□□ -1.61
NUBP1P53384 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUBP1P53384 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NUBP1P53384 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
NUBP1P53384 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.98□□□□□ -1.61
NUBP1P53384 snoU2-30.2-201ENST00000362805 70 ntBASIC4.98□□□□□ -1.61
NUBP1P53384 snoU2-30.1-201ENST00000365012 70 ntBASIC4.98□□□□□ -1.61
NUBP1P53384 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUBP1P53384 RNU6-546P-201ENST00000383991 107 ntBASIC4.98□□□□□ -1.61
NUBP1P53384 RPS26P8-201ENST00000393490 348 ntBASIC4.98□□□□□ -1.61
NUBP1P53384 AL035398.1-201ENST00000430869 322 ntBASIC4.98□□□□□ -1.61
NUBP1P53384 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.98□□□□□ -1.61
NUBP1P53384 MIR1255B1-201ENST00000636325 63 ntBASIC4.98□□□□□ -1.61
NUBP1P53384 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.98□□□□□ -1.61
NUBP1P53384 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUBP1P53384 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUBP1P53384 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUBP1P53384 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUBP1P53384 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUBP1P53384 AC104623.2-202ENST00000623477 4002 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
NUBP1P53384 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUBP1P53384 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.97□□□□□ -1.61
NUBP1P53384 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
NUBP1P53384 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUBP1P53384 RNA5SP453-201ENST00000362503 119 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 RNU6-268P-201ENST00000364174 107 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 RNU6-219P-201ENST00000364728 107 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 RNU4-16P-201ENST00000364737 141 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 SNORA11.2-201ENST00000408318 127 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 AC060773.1-201ENST00000421698 310 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 RPS12P18-201ENST00000442381 270 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 RNU6-267P-201ENST00000516714 103 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.97□□□□□ -1.61
NUBP1P53384 MIR4777-201ENST00000583710 86 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.97□□□□□ -1.61
NUBP1P53384 YPEL5P2-201ENST00000605553 359 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 AC006111.3-201ENST00000622137 383 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 CR392039.5-201ENST00000623201 510 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.97□□□□□ -1.61
NUBP1P53384 AP001029.2-203ENST00000589795 4910 ntBASIC4.97□□□□□ -1.61
NUBP1P53384 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUBP1P53384 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
NUBP1P53384 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUBP1P53384 MFSD8-242ENST00000641690 4199 ntBASIC4.96□□□□□ -1.62
NUBP1P53384 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUBP1P53384 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUBP1P53384 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUBP1P53384 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
NUBP1P53384 Y_RNA.95-201ENST00000363079 95 ntBASIC4.96□□□□□ -1.62
NUBP1P53384 MIR605-201ENST00000385078 83 ntBASIC4.96□□□□□ -1.62
NUBP1P53384 RN7SKP200-201ENST00000410564 320 ntBASIC4.96□□□□□ -1.62
NUBP1P53384 AC091167.1-201ENST00000492017 396 ntBASIC4.96□□□□□ -1.62
NUBP1P53384 AL592156.1-201ENST00000508758 304 ntBASIC4.96□□□□□ -1.62
NUBP1P53384 SNORA67.7-201ENST00000516664 135 ntBASIC4.96□□□□□ -1.62
NUBP1P53384 MIR548Z-201ENST00000584743 97 ntBASIC4.96□□□□□ -1.62
NUBP1P53384 AC006130.2-201ENST00000586202 326 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms