Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.2□□□□□ -2.06
PDX1P52945 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.2□□□□□ -2.06
PDX1P52945 AC063943.3-201ENST00000615562 356 ntBASIC2.2□□□□□ -2.06
PDX1P52945 MIR6873-201ENST00000622788 63 ntBASIC2.2□□□□□ -2.06
PDX1P52945 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
PDX1P52945 KPNA2P1-201ENST00000458289 1591 ntBASIC2.19□□□□□ -2.06
PDX1P52945 RNU5B-2P-201ENST00000363036 113 ntBASIC2.19□□□□□ -2.06
PDX1P52945 Y_RNA.529-201ENST00000384586 119 ntBASIC2.19□□□□□ -2.06
PDX1P52945 Y_RNA.533-201ENST00000384596 114 ntBASIC2.19□□□□□ -2.06
PDX1P52945 SNORA64-201ENST00000384674 134 ntBASIC2.19□□□□□ -2.06
PDX1P52945 RNA5SP201-201ENST00000410316 124 ntBASIC2.19□□□□□ -2.06
PDX1P52945 RNU6-174P-201ENST00000410406 106 ntBASIC2.19□□□□□ -2.06
PDX1P52945 RNU6-1304P-201ENST00000411374 106 ntBASIC2.19□□□□□ -2.06
PDX1P52945 HMGB3P2-201ENST00000411913 584 ntBASIC2.19□□□□□ -2.06
PDX1P52945 EIF1AXP1-201ENST00000419267 435 ntBASIC2.19□□□□□ -2.06
PDX1P52945 RPS15AP28-201ENST00000435088 386 ntBASIC2.19□□□□□ -2.06
PDX1P52945 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.19□□□□□ -2.06
PDX1P52945 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.19□□□□□ -2.06
PDX1P52945 RPL7P42-201ENST00000481005 679 ntBASIC2.19□□□□□ -2.06
PDX1P52945 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.19□□□□□ -2.06
PDX1P52945 AC108210.2-201ENST00000503681 201 ntBASIC2.19□□□□□ -2.06
PDX1P52945 AC107222.1-201ENST00000510899 637 ntBASIC2.19□□□□□ -2.06
PDX1P52945 SNORA48.11-201ENST00000517015 89 ntBASIC2.19□□□□□ -2.06
PDX1P52945 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.19□□□□□ -2.06
PDX1P52945 AC009229.3-201ENST00000608056 282 ntBASIC2.19□□□□□ -2.06
PDX1P52945 MIR1302-1-201ENST00000637932 143 ntBASIC2.19□□□□□ -2.06
PDX1P52945 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PDX1P52945 RNU6-593P-201ENST00000364716 112 ntBASIC2.18□□□□□ -2.06
PDX1P52945 Y_RNA.404-201ENST00000383978 102 ntBASIC2.18□□□□□ -2.06
PDX1P52945 RNU6-142P-201ENST00000384019 107 ntBASIC2.18□□□□□ -2.06
PDX1P52945 RNU6-1009P-201ENST00000390996 107 ntBASIC2.18□□□□□ -2.06
PDX1P52945 Y_RNA.597-201ENST00000410463 100 ntBASIC2.18□□□□□ -2.06
PDX1P52945 RNU2-63P-201ENST00000410792 194 ntBASIC2.18□□□□□ -2.06
PDX1P52945 RNU6-370P-201ENST00000411008 104 ntBASIC2.18□□□□□ -2.06
PDX1P52945 AL358453.1-201ENST00000422522 250 ntBASIC2.18□□□□□ -2.06
PDX1P52945 AL603825.1-201ENST00000438481 80 ntBASIC2.18□□□□□ -2.06
PDX1P52945 Y_RNA.635-201ENST00000459041 101 ntBASIC2.18□□□□□ -2.06
PDX1P52945 AC018868.1-201ENST00000491307 315 ntBASIC2.18□□□□□ -2.06
PDX1P52945 CKS1BP2-201ENST00000497342 240 ntBASIC2.18□□□□□ -2.06
PDX1P52945 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.18□□□□□ -2.06
PDX1P52945 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.18□□□□□ -2.06
PDX1P52945 RNU6-991P-201ENST00000516168 107 ntBASIC2.18□□□□□ -2.06
PDX1P52945 AC093027.1-201ENST00000546698 429 ntBASIC2.18□□□□□ -2.06
PDX1P52945 RPS3AP23-202ENST00000574601 686 ntBASIC2.18□□□□□ -2.06
PDX1P52945 FGF7P1-201ENST00000582820 288 ntBASIC2.18□□□□□ -2.06
PDX1P52945 AL355297.2-201ENST00000604792 129 ntBASIC2.18□□□□□ -2.06
PDX1P52945 AP000654.2-201ENST00000605633 586 ntBASIC2.18□□□□□ -2.06
PDX1P52945 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.18□□□□□ -2.06
PDX1P52945 AC099654.5-201ENST00000636479 350 ntBASIC2.18□□□□□ -2.06
PDX1P52945 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.18□□□□□ -2.06
PDX1P52945 AC112487.2-201ENST00000637950 304 ntBASIC2.18□□□□□ -2.06
PDX1P52945 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PDX1P52945 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PDX1P52945 MTND5P9-201ENST00000503854 1755 ntBASIC2.18□□□□□ -2.06
PDX1P52945 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.17□□□□□ -2.06
PDX1P52945 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PDX1P52945 Y_RNA.48-201ENST00000362710 103 ntBASIC2.17□□□□□ -2.06
PDX1P52945 Y_RNA.263-201ENST00000364659 114 ntBASIC2.17□□□□□ -2.06
PDX1P52945 RNU6-378P-201ENST00000384324 107 ntBASIC2.17□□□□□ -2.06
PDX1P52945 Y_RNA.482-201ENST00000384377 111 ntBASIC2.17□□□□□ -2.06
PDX1P52945 SNORA80E-201ENST00000384744 137 ntBASIC2.17□□□□□ -2.06
PDX1P52945 MIR487A-201ENST00000385009 80 ntBASIC2.17□□□□□ -2.06
PDX1P52945 MIR29B2-201ENST00000385055 81 ntBASIC2.17□□□□□ -2.06
PDX1P52945 MTCYBP2-201ENST00000407745 171 ntBASIC2.17□□□□□ -2.06
PDX1P52945 RNU6-1050P-201ENST00000410388 107 ntBASIC2.17□□□□□ -2.06
PDX1P52945 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.17□□□□□ -2.06
PDX1P52945 EIF4EP2-201ENST00000422816 654 ntBASIC2.17□□□□□ -2.06
PDX1P52945 Z82188.1-201ENST00000436709 154 ntBASIC2.17□□□□□ -2.06
PDX1P52945 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.17□□□□□ -2.06
PDX1P52945 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PDX1P52945 CBX3P8-201ENST00000532412 525 ntBASIC2.17□□□□□ -2.06
PDX1P52945 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.17□□□□□ -2.06
PDX1P52945 AC008121.3-201ENST00000618726 433 ntBASIC2.17□□□□□ -2.06
PDX1P52945 AC098657.3-201ENST00000620434 263 ntBASIC2.17□□□□□ -2.06
PDX1P52945 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PDX1P52945 AC233981.2-201ENST00000611524 1614 ntBASIC2.17□□□□□ -2.06
PDX1P52945 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.17□□□□□ -2.06
PDX1P52945 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.16□□□□□ -2.06
PDX1P52945 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.16□□□□□ -2.06
PDX1P52945 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.16□□□□□ -2.06
PDX1P52945 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PDX1P52945 RNU6-596P-201ENST00000365395 98 ntBASIC2.16□□□□□ -2.06
PDX1P52945 MIR221-201ENST00000385135 110 ntBASIC2.16□□□□□ -2.06
PDX1P52945 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.16□□□□□ -2.06
PDX1P52945 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.16□□□□□ -2.06
PDX1P52945 NCOR1P3-201ENST00000420479 303 ntBASIC2.16□□□□□ -2.06
PDX1P52945 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.16□□□□□ -2.06
PDX1P52945 AC243428.1-201ENST00000421099 264 ntBASIC2.16□□□□□ -2.06
PDX1P52945 AC012306.1-201ENST00000423267 114 ntBASIC2.16□□□□□ -2.06
PDX1P52945 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.16□□□□□ -2.06
PDX1P52945 CYP2C59P-201ENST00000457790 269 ntBASIC2.16□□□□□ -2.06
PDX1P52945 AC068781.1-201ENST00000488231 618 ntBASIC2.16□□□□□ -2.06
PDX1P52945 RNA5SP384-201ENST00000516615 116 ntBASIC2.16□□□□□ -2.06
PDX1P52945 RNU6-965P-201ENST00000516721 96 ntBASIC2.16□□□□□ -2.06
PDX1P52945 Y_RNA.708-201ENST00000516950 96 ntBASIC2.16□□□□□ -2.06
PDX1P52945 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.16□□□□□ -2.06
PDX1P52945 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.16□□□□□ -2.06
PDX1P52945 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.16□□□□□ -2.06
PDX1P52945 APOOP3-201ENST00000536787 586 ntBASIC2.16□□□□□ -2.06
PDX1P52945 AC016256.1-201ENST00000547971 354 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms