Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SNRPGP7-201ENST00000469016 106 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 RPS23P5-201ENST00000495419 428 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 AK3P2-201ENST00000507976 429 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 AC079395.1-201ENST00000510981 262 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.08□□□□□ -2.4
GTF2A1P52655 RNU2-10P-201ENST00000516375 211 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 AC087854.1-201ENST00000519706 414 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 AC024995.1-201ENST00000523014 93 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.08□□□□□ -2.4
GTF2A1P52655 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.08□□□□□ -2.4
GTF2A1P52655 AC078795.3-201ENST00000602913 472 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 AL158032.1-201ENST00000605401 106 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 AC012409.4-201ENST00000612923 249 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 Z69720.2-201ENST00000624755 279 ntBASIC0.08□□□□□ -2.4
GTF2A1P52655 RNU6-371P-201ENST00000364283 108 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 RNU6-1327P-201ENST00000365302 105 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 RNU4-48P-201ENST00000365559 182 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 SNORA36.2-201ENST00000384004 127 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 RNU6-163P-201ENST00000384396 106 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 RNU6-692P-201ENST00000384496 107 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 SNORD89-201ENST00000390981 114 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 AL034345.1-201ENST00000407768 123 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 RNU6-1245P-201ENST00000411130 106 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.07□□□□□ -2.4
GTF2A1P52655 AC090049.2-201ENST00000550377 109 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 MTATP6P25-201ENST00000574491 261 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 TMF1P1-201ENST00000576058 373 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 AC022217.4-201ENST00000604389 163 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.07□□□□□ -2.4
GTF2A1P52655 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.07□□□□□ -2.4
GTF2A1P52655 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 AC100810.6-201ENST00000638068 285 ntBASIC0.07□□□□□ -2.4
GTF2A1P52655 Y_RNA.287-201ENST00000364853 94 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 MIR660-201ENST00000385235 97 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 RN7SKP200-201ENST00000410564 320 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
GTF2A1P52655 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.06□□□□□ -2.4
GTF2A1P52655 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.06□□□□□ -2.4
GTF2A1P52655 RNU6-1132P-201ENST00000459214 107 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.06□□□□□ -2.4
GTF2A1P52655 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.06□□□□□ -2.4
GTF2A1P52655 AC105313.1-201ENST00000509121 353 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 RNU6-123P-201ENST00000516163 102 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 RNA5SP220-201ENST00000516298 104 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 AC106038.2-201ENST00000520706 568 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 AC026616.1-201ENST00000523157 525 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
GTF2A1P52655 AC097065.2-201ENST00000608159 533 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 MIR8054-201ENST00000620877 86 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 7SK.10-201ENST00000621414 298 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
GTF2A1P52655 AL589743.1-201ENST00000551932 2712 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 AL445523.1-201ENST00000451184 1362 ntBASIC0.06□□□□□ -2.4
GTF2A1P52655 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.05□□□□□ -2.4
GTF2A1P52655 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
GTF2A1P52655 RNU6-342P-201ENST00000384521 104 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 MIR499A-201ENST00000384903 122 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 RNU6-298P-201ENST00000390888 96 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 RNA5SP467-201ENST00000391274 118 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 RNU2-3P-201ENST00000410144 191 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 RNA5SP222-201ENST00000411039 105 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 RNU6-293P-201ENST00000411259 106 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 AC006366.1-201ENST00000422002 759 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 AC007283.2-201ENST00000424739 197 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 AC078809.1-201ENST00000427601 140 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 CALM2P2-201ENST00000428512 440 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.05□□□□□ -2.4
GTF2A1P52655 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 RPL39P39-201ENST00000455840 151 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 AC245047.8-201ENST00000456455 284 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 AC022364.2-201ENST00000457963 554 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.05□□□□□ -2.4
GTF2A1P52655 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.05□□□□□ -2.4
GTF2A1P52655 RNU6-917P-201ENST00000516294 104 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 ADI1P3-201ENST00000549509 470 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 AC090517.1-201ENST00000569307 266 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 MIR4431-201ENST00000579990 94 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 AC009994.1-201ENST00000606889 253 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 AC024060.1-201ENST00000607052 494 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 AC097478.2-201ENST00000610572 514 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 U6.108-201ENST00000637764 58 ntBASIC0.05□□□□□ -2.4
GTF2A1P52655 Y_RNA.4-201ENST00000362333 112 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 Y_RNA.46-201ENST00000362695 102 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 Y_RNA.164-201ENST00000363709 102 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 SNORD32A-201ENST00000364805 84 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 RNU6-417P-201ENST00000384712 107 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 AL451046.2-201ENST00000403074 277 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 MIR1283-1-201ENST00000408494 87 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.04□□□□□ -2.4
GTF2A1P52655 MRPS18CP6-201ENST00000423587 223 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.04□□□□□ -2.4
GTF2A1P52655 snoU13.25-201ENST00000458945 104 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.04□□□□□ -2.4
GTF2A1P52655 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.04□□□□□ -2.4
GTF2A1P52655 MTCO3P27-201ENST00000514397 196 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.04□□□□□ -2.4
GTF2A1P52655 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.04□□□□□ -2.4
GTF2A1P52655 AC027419.1-201ENST00000522976 328 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms