Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.03□□□□□ -2.4
POLR2JP52435 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.03□□□□□ -2.4
POLR2JP52435 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
POLR2JP52435 SNORA70.12-201ENST00000516084 153 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 AC027419.1-201ENST00000522976 328 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 AC090049.2-201ENST00000550377 109 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 EIF4A1P12-201ENST00000551910 141 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.03□□□□□ -2.4
POLR2JP52435 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.03□□□□□ -2.4
POLR2JP52435 MIR3923-201ENST00000579521 83 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 MIR4431-201ENST00000579990 94 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 AC022217.4-201ENST00000604389 163 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-6P-201ENST00000606623 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 AC108747.1-201ENST00000609508 535 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 7SK.10-201ENST00000621414 298 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-1141P-201ENST00000364520 107 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 Y_RNA.287-201ENST00000364853 94 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 Y_RNA.311-201ENST00000365068 96 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
POLR2JP52435 SNORA36.2-201ENST00000384004 127 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 RNU6-769P-201ENST00000384407 104 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 RNU6-342P-201ENST00000384521 104 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 RPS20P2-201ENST00000402520 389 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 AL034345.1-201ENST00000407768 123 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 RNA5SP222-201ENST00000411039 105 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 MRPS18CP6-201ENST00000423587 223 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 AL445305.1-201ENST00000432577 575 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 HSFY7P-201ENST00000432672 318 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 HSFY8P-201ENST00000437934 318 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.02□□□□□ -2.41
POLR2JP52435 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.02□□□□□ -2.41
POLR2JP52435 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.02□□□□□ -2.41
POLR2JP52435 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.02□□□□□ -2.41
POLR2JP52435 RPS23P5-201ENST00000495419 428 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.02□□□□□ -2.41
POLR2JP52435 RNU6-917P-201ENST00000516294 104 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 AC106038.2-201ENST00000520706 568 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
POLR2JP52435 AC011195.1-201ENST00000578177 177 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 MTATP6P2-201ENST00000603319 678 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 AC097065.2-201ENST00000608159 533 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 AC245297.2-201ENST00000610119 565 ntBASIC0.02□□□□□ -2.41
POLR2JP52435 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.02□□□□□ -2.41
POLR2JP52435 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
POLR2JP52435 RNU6-462P-201ENST00000362659 105 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 RNU6-371P-201ENST00000364283 108 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 Y_RNA.354-201ENST00000365448 111 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 RNU6-692P-201ENST00000384496 107 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 MIR660-201ENST00000385235 97 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 RNA5SP467-201ENST00000391274 118 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 RN7SKP200-201ENST00000410564 320 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 RNU2-70P-201ENST00000410718 179 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 RNU2-62P-201ENST00000410868 191 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.01□□□□□ -2.41
POLR2JP52435 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
POLR2JP52435 AC007283.2-201ENST00000424739 197 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 RPL23AP50-201ENST00000434149 455 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 USP9YP28-201ENST00000435142 589 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.01□□□□□ -2.41
POLR2JP52435 AC245047.8-201ENST00000456455 284 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 SNRPGP7-201ENST00000469016 106 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 RNU2-34P-201ENST00000516534 121 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 AC022784.5-201ENST00000522241 437 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 AC024995.1-201ENST00000523014 93 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 AL596327.1-201ENST00000603629 213 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 AC100812.1-201ENST00000607622 580 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 MIR8054-201ENST00000620877 86 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 MIR6734-201ENST00000621166 68 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 U6.108-201ENST00000637764 58 ntBASIC0.01□□□□□ -2.41
POLR2JP52435 MIR103A1-201ENST00000362165 78 ntBASIC0□□□□□ -2.41
POLR2JP52435 SNORD114-23-201ENST00000363536 72 ntBASIC0□□□□□ -2.41
POLR2JP52435 RNU6-417P-201ENST00000384712 107 ntBASIC0□□□□□ -2.41
POLR2JP52435 SNORA26.3-201ENST00000391119 136 ntBASIC0□□□□□ -2.41
POLR2JP52435 AC019070.1-201ENST00000415008 1024 ntBASIC0□□□□□ -2.41
POLR2JP52435 USP9YP21-201ENST00000420603 432 ntBASIC0□□□□□ -2.41
POLR2JP52435 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0□□□□□ -2.41
POLR2JP52435 RPL39P39-201ENST00000455840 151 ntBASIC0□□□□□ -2.41
POLR2JP52435 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0□□□□□ -2.41
POLR2JP52435 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0□□□□□ -2.41
POLR2JP52435 AC026616.1-201ENST00000523157 525 ntBASIC0□□□□□ -2.41
POLR2JP52435 AP002001.1-203ENST00000534002 267 ntBASIC0□□□□□ -2.41
POLR2JP52435 TMF1P1-201ENST00000576058 373 ntBASIC0□□□□□ -2.41
POLR2JP52435 MIR4778-201ENST00000577635 80 ntBASIC0□□□□□ -2.41
POLR2JP52435 AC131055.1-201ENST00000584626 316 ntBASIC0□□□□□ -2.41
POLR2JP52435 BNIP3P26-201ENST00000600827 554 ntBASIC0□□□□□ -2.41
POLR2JP52435 AC078795.3-201ENST00000602913 472 ntBASIC0□□□□□ -2.41
POLR2JP52435 RPL17P51-201ENST00000605218 238 ntBASIC0□□□□□ -2.41
POLR2JP52435 AL158032.1-201ENST00000605401 106 ntBASIC0□□□□□ -2.41
POLR2JP52435 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0□□□□□ -2.41
POLR2JP52435 AC022709.1-201ENST00000615967 87 ntBASIC0□□□□□ -2.41
POLR2JP52435 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0□□□□□ -2.41
POLR2JP52435 RNU4-56P-201ENST00000364700 142 ntBASIC-0.01□□□□□ -2.41
POLR2JP52435 RNU4-45P-201ENST00000365469 141 ntBASIC-0.01□□□□□ -2.41
POLR2JP52435 RNY1P14-201ENST00000384426 108 ntBASIC-0.01□□□□□ -2.41
POLR2JP52435 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.01□□□□□ -2.41
POLR2JP52435 MIR140-201ENST00000385282 100 ntBASIC-0.01□□□□□ -2.41
POLR2JP52435 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.01□□□□□ -2.41
POLR2JP52435 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.01□□□□□ -2.41
POLR2JP52435 CALM2P2-201ENST00000428512 440 ntBASIC-0.01□□□□□ -2.41
POLR2JP52435 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms