Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MIR5701-1-201ENST00000585138 82 ntBASIC2.74□□□□□ -1.97
NEK3P51956 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.74□□□□□ -1.97
NEK3P51956 TCL6_2.1-201ENST00000615162 119 ntBASIC2.74□□□□□ -1.97
NEK3P51956 MIR5701-2-201ENST00000615634 82 ntBASIC2.74□□□□□ -1.97
NEK3P51956 MIR1248-201ENST00000629190 106 ntBASIC2.74□□□□□ -1.97
NEK3P51956 AL669831.3-213ENST00000636676 183 ntBASIC2.74□□□□□ -1.97
NEK3P51956 MIR1302-1-201ENST00000637932 143 ntBASIC2.74□□□□□ -1.97
NEK3P51956 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NEK3P51956 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NEK3P51956 Y_RNA.99-201ENST00000363138 105 ntBASIC2.73□□□□□ -1.97
NEK3P51956 MIR196B-201ENST00000384852 84 ntBASIC2.73□□□□□ -1.97
NEK3P51956 RNU2-52P-201ENST00000410680 190 ntBASIC2.73□□□□□ -1.97
NEK3P51956 RNU4-14P-201ENST00000410858 122 ntBASIC2.73□□□□□ -1.97
NEK3P51956 RNU2-41P-201ENST00000410991 178 ntBASIC2.73□□□□□ -1.97
NEK3P51956 RNA5SP270-201ENST00000411361 118 ntBASIC2.73□□□□□ -1.97
NEK3P51956 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.73□□□□□ -1.97
NEK3P51956 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.73□□□□□ -1.97
NEK3P51956 AC108938.1-201ENST00000451204 136 ntBASIC2.73□□□□□ -1.97
NEK3P51956 PRELID3BP1-201ENST00000457142 540 ntBASIC2.73□□□□□ -1.97
NEK3P51956 AC107032.1-201ENST00000485945 480 ntBASIC2.73□□□□□ -1.97
NEK3P51956 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.73□□□□□ -1.97
NEK3P51956 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.73□□□□□ -1.97
NEK3P51956 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.73□□□□□ -1.97
NEK3P51956 RNU5F-4P-201ENST00000516581 114 ntBASIC2.73□□□□□ -1.97
NEK3P51956 AC134698.4-201ENST00000523451 826 ntBASIC2.73□□□□□ -1.97
NEK3P51956 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.73□□□□□ -1.97
NEK3P51956 RPS3AP23-202ENST00000574601 686 ntBASIC2.73□□□□□ -1.97
NEK3P51956 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.73□□□□□ -1.97
NEK3P51956 MIR5194-201ENST00000582634 120 ntBASIC2.73□□□□□ -1.97
NEK3P51956 AC100812.1-201ENST00000607622 580 ntBASIC2.73□□□□□ -1.97
NEK3P51956 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.73□□□□□ -1.97
NEK3P51956 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
NEK3P51956 AL136360.1-201ENST00000503377 1900 ntBASIC2.73□□□□□ -1.97
NEK3P51956 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NEK3P51956 ZNF271P-202ENST00000465539 1970 ntBASIC2.72□□□□□ -1.97
NEK3P51956 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEK3P51956 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NEK3P51956 SNORA12.2-201ENST00000391040 156 ntBASIC2.72□□□□□ -1.97
NEK3P51956 RNU6-700P-201ENST00000391043 107 ntBASIC2.72□□□□□ -1.97
NEK3P51956 MTCYBP10-201ENST00000424905 650 ntBASIC2.72□□□□□ -1.97
NEK3P51956 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.72□□□□□ -1.97
NEK3P51956 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.72□□□□□ -1.97
NEK3P51956 RPL7P42-201ENST00000481005 679 ntBASIC2.72□□□□□ -1.97
NEK3P51956 AC097473.1-201ENST00000508142 408 ntBASIC2.72□□□□□ -1.97
NEK3P51956 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.72□□□□□ -1.97
NEK3P51956 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.72□□□□□ -1.97
NEK3P51956 AC009127.3-201ENST00000570531 403 ntBASIC2.72□□□□□ -1.97
NEK3P51956 AC016727.2-201ENST00000603988 621 ntBASIC2.72□□□□□ -1.97
NEK3P51956 AL359757.2-201ENST00000624309 274 ntBASIC2.72□□□□□ -1.97
NEK3P51956 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
NEK3P51956 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
NEK3P51956 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NEK3P51956 RNA5SP393-201ENST00000363423 117 ntBASIC2.71□□□□□ -1.98
NEK3P51956 Y_RNA.319-201ENST00000365138 92 ntBASIC2.71□□□□□ -1.98
NEK3P51956 Y_RNA.404-201ENST00000383978 102 ntBASIC2.71□□□□□ -1.98
NEK3P51956 AL139095.1-201ENST00000404326 391 ntBASIC2.71□□□□□ -1.98
NEK3P51956 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.71□□□□□ -1.98
NEK3P51956 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.71□□□□□ -1.98
NEK3P51956 Z82188.1-201ENST00000436709 154 ntBASIC2.71□□□□□ -1.98
NEK3P51956 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.71□□□□□ -1.98
NEK3P51956 AC011753.1-201ENST00000451001 220 ntBASIC2.71□□□□□ -1.98
NEK3P51956 AC093303.1-201ENST00000514549 295 ntBASIC2.71□□□□□ -1.98
NEK3P51956 Y_RNA.706-201ENST00000516933 99 ntBASIC2.71□□□□□ -1.98
NEK3P51956 RNA5SP490-201ENST00000517141 136 ntBASIC2.71□□□□□ -1.98
NEK3P51956 AL031274.2-201ENST00000599419 203 ntBASIC2.71□□□□□ -1.98
NEK3P51956 AC005014.2-201ENST00000607795 599 ntBASIC2.71□□□□□ -1.98
NEK3P51956 AC010297.1-201ENST00000623948 149 ntBASIC2.71□□□□□ -1.98
NEK3P51956 AC092608.2-201ENST00000624427 218 ntBASIC2.71□□□□□ -1.98
NEK3P51956 MIR203B-201ENST00000636080 86 ntBASIC2.71□□□□□ -1.98
NEK3P51956 FO624990.1-201ENST00000636373 85 ntBASIC2.71□□□□□ -1.98
NEK3P51956 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NEK3P51956 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NEK3P51956 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NEK3P51956 RNY1P16-201ENST00000363063 111 ntBASIC2.7□□□□□ -1.98
NEK3P51956 SNORA3A-201ENST00000364113 130 ntBASIC2.7□□□□□ -1.98
NEK3P51956 RNU6-280P-201ENST00000364145 104 ntBASIC2.7□□□□□ -1.98
NEK3P51956 DEFA7P-201ENST00000382676 285 ntBASIC2.7□□□□□ -1.98
NEK3P51956 SNORA75.6-201ENST00000391318 127 ntBASIC2.7□□□□□ -1.98
NEK3P51956 MIR300-201ENST00000401138 83 ntBASIC2.7□□□□□ -1.98
NEK3P51956 AC027124.2-201ENST00000428249 105 ntBASIC2.7□□□□□ -1.98
NEK3P51956 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.7□□□□□ -1.98
NEK3P51956 Y_RNA.653-201ENST00000459091 95 ntBASIC2.7□□□□□ -1.98
NEK3P51956 AC093259.1-201ENST00000509755 300 ntBASIC2.7□□□□□ -1.98
NEK3P51956 AC096725.1-201ENST00000514266 313 ntBASIC2.7□□□□□ -1.98
NEK3P51956 RNU6-507P-201ENST00000516045 100 ntBASIC2.7□□□□□ -1.98
NEK3P51956 RNU6-1098P-201ENST00000516772 96 ntBASIC2.7□□□□□ -1.98
NEK3P51956 RNU6-58P-201ENST00000517143 103 ntBASIC2.7□□□□□ -1.98
NEK3P51956 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.7□□□□□ -1.98
NEK3P51956 AC233702.2-202ENST00000562547 291 ntBASIC2.7□□□□□ -1.98
NEK3P51956 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.7□□□□□ -1.98
NEK3P51956 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.7□□□□□ -1.98
NEK3P51956 AC078899.2-201ENST00000595282 212 ntBASIC2.7□□□□□ -1.98
NEK3P51956 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.7□□□□□ -1.98
NEK3P51956 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.7□□□□□ -1.98
NEK3P51956 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NEK3P51956 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NEK3P51956 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NEK3P51956 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NEK3P51956 SNORD31B-201ENST00000364977 69 ntBASIC2.69□□□□□ -1.98
NEK3P51956 Y_RNA.332-201ENST00000365271 113 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms