Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TIMM9P3-201ENST00000428659 274 ntBASIC0.13□□□□□ -2.39
SRP9P49458 AC243964.1-201ENST00000441814 261 ntBASIC0.13□□□□□ -2.39
SRP9P49458 AL360271.2-201ENST00000447710 161 ntBASIC0.13□□□□□ -2.39
SRP9P49458 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.13□□□□□ -2.39
SRP9P49458 AC021146.8-201ENST00000507455 733 ntBASIC0.13□□□□□ -2.39
SRP9P49458 AC027338.1-201ENST00000514840 825 ntBASIC0.13□□□□□ -2.39
SRP9P49458 RN7SKP12-201ENST00000516275 143 ntBASIC0.13□□□□□ -2.39
SRP9P49458 MTND3P13-201ENST00000574391 343 ntBASIC0.13□□□□□ -2.39
SRP9P49458 AC008752.3-201ENST00000588113 712 ntBASIC0.13□□□□□ -2.39
SRP9P49458 AL596327.1-201ENST00000603629 213 ntBASIC0.13□□□□□ -2.39
SRP9P49458 PCGEM1.1-201ENST00000613431 131 ntBASIC0.13□□□□□ -2.39
SRP9P49458 7SK.10-201ENST00000621414 298 ntBASIC0.13□□□□□ -2.39
SRP9P49458 CASC19-280ENST00000642102 1351 ntBASIC0.13□□□□□ -2.39
SRP9P49458 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
SRP9P49458 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
SRP9P49458 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
SRP9P49458 MIRLET7D-201ENST00000362263 87 ntBASIC0.12□□□□□ -2.39
SRP9P49458 RNU6-43P-201ENST00000384302 107 ntBASIC0.12□□□□□ -2.39
SRP9P49458 MIR193B-201ENST00000384907 83 ntBASIC0.12□□□□□ -2.39
SRP9P49458 RNA5SP222-201ENST00000411039 105 ntBASIC0.12□□□□□ -2.39
SRP9P49458 MTND4P3-201ENST00000417829 541 ntBASIC0.12□□□□□ -2.39
SRP9P49458 USP9YP11-201ENST00000427537 717 ntBASIC0.12□□□□□ -2.39
SRP9P49458 AC010975.2-201ENST00000427781 588 ntBASIC0.12□□□□□ -2.39
SRP9P49458 AC244670.1-201ENST00000436879 112 ntBASIC0.12□□□□□ -2.39
SRP9P49458 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.12□□□□□ -2.39
SRP9P49458 AL133217.1-201ENST00000450980 425 ntBASIC0.12□□□□□ -2.39
SRP9P49458 HMGB1P29-201ENST00000505659 499 ntBASIC0.12□□□□□ -2.39
SRP9P49458 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.12□□□□□ -2.39
SRP9P49458 RNU6-1028P-201ENST00000517164 93 ntBASIC0.12□□□□□ -2.39
SRP9P49458 AC087854.1-201ENST00000519706 414 ntBASIC0.12□□□□□ -2.39
SRP9P49458 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.12□□□□□ -2.39
SRP9P49458 AP003072.2-201ENST00000527756 676 ntBASIC0.12□□□□□ -2.39
SRP9P49458 AC007834.2-201ENST00000536310 343 ntBASIC0.12□□□□□ -2.39
SRP9P49458 MIR3923-201ENST00000579521 83 ntBASIC0.12□□□□□ -2.39
SRP9P49458 BNIP3P26-201ENST00000600827 554 ntBASIC0.12□□□□□ -2.39
SRP9P49458 AC005776.1-201ENST00000603164 290 ntBASIC0.12□□□□□ -2.39
SRP9P49458 BCRP9-201ENST00000605312 388 ntBASIC0.12□□□□□ -2.39
SRP9P49458 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.12□□□□□ -2.39
SRP9P49458 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.12□□□□□ -2.39
SRP9P49458 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.12□□□□□ -2.39
SRP9P49458 AC100810.6-201ENST00000638068 285 ntBASIC0.12□□□□□ -2.39
SRP9P49458 AC006927.4-201ENST00000639187 543 ntBASIC0.12□□□□□ -2.39
SRP9P49458 MTND5P16-201ENST00000460269 1703 ntBASIC0.11□□□□□ -2.39
SRP9P49458 Y_RNA.36-201ENST00000362602 112 ntBASIC0.11□□□□□ -2.39
SRP9P49458 RNU6-462P-201ENST00000362659 105 ntBASIC0.11□□□□□ -2.39
SRP9P49458 snoU2-30.2-201ENST00000362805 70 ntBASIC0.11□□□□□ -2.39
SRP9P49458 Y_RNA.192-201ENST00000363977 102 ntBASIC0.11□□□□□ -2.39
SRP9P49458 RNU4-76P-201ENST00000364509 141 ntBASIC0.11□□□□□ -2.39
SRP9P49458 RNU4-56P-201ENST00000364700 142 ntBASIC0.11□□□□□ -2.39
SRP9P49458 RNU6-621P-201ENST00000364752 109 ntBASIC0.11□□□□□ -2.39
SRP9P49458 RNU6-378P-201ENST00000384324 107 ntBASIC0.11□□□□□ -2.39
SRP9P49458 RNU6-769P-201ENST00000384407 104 ntBASIC0.11□□□□□ -2.39
SRP9P49458 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
SRP9P49458 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.11□□□□□ -2.39
SRP9P49458 USP9YP28-201ENST00000435142 589 ntBASIC0.11□□□□□ -2.39
SRP9P49458 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.11□□□□□ -2.39
SRP9P49458 AC092989.1-201ENST00000481235 277 ntBASIC0.11□□□□□ -2.39
SRP9P49458 RPS23P5-201ENST00000495419 428 ntBASIC0.11□□□□□ -2.39
SRP9P49458 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.11□□□□□ -2.39
SRP9P49458 SNORA62.5-201ENST00000516634 120 ntBASIC0.11□□□□□ -2.39
SRP9P49458 MIR4778-201ENST00000577635 80 ntBASIC0.11□□□□□ -2.39
SRP9P49458 MIR544B-201ENST00000582372 78 ntBASIC0.11□□□□□ -2.39
SRP9P49458 Z98751.3-201ENST00000604447 521 ntBASIC0.11□□□□□ -2.39
SRP9P49458 AC091965.4-201ENST00000607691 587 ntBASIC0.11□□□□□ -2.39
SRP9P49458 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.11□□□□□ -2.39
SRP9P49458 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.11□□□□□ -2.39
SRP9P49458 AC090625.1-201ENST00000357130 210 ntBASIC0.1□□□□□ -2.39
SRP9P49458 RNU1-76P-201ENST00000362903 159 ntBASIC0.1□□□□□ -2.39
SRP9P49458 RNU6-105P-201ENST00000363909 104 ntBASIC0.1□□□□□ -2.39
SRP9P49458 RNU6-692P-201ENST00000384496 107 ntBASIC0.1□□□□□ -2.39
SRP9P49458 RNU6-417P-201ENST00000384712 107 ntBASIC0.1□□□□□ -2.39
SRP9P49458 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.1□□□□□ -2.39
SRP9P49458 HMGN2P34-201ENST00000437647 269 ntBASIC0.1□□□□□ -2.39
SRP9P49458 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.1□□□□□ -2.39
SRP9P49458 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.1□□□□□ -2.39
SRP9P49458 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.1□□□□□ -2.39
SRP9P49458 RNU6-123P-201ENST00000516163 102 ntBASIC0.1□□□□□ -2.39
SRP9P49458 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.1□□□□□ -2.39
SRP9P49458 AC090517.1-201ENST00000569307 266 ntBASIC0.1□□□□□ -2.39
SRP9P49458 AC011195.1-201ENST00000578177 177 ntBASIC0.1□□□□□ -2.39
SRP9P49458 AL390123.1-201ENST00000603216 237 ntBASIC0.1□□□□□ -2.39
SRP9P49458 AL031775.1-201ENST00000607014 887 ntBASIC0.1□□□□□ -2.39
SRP9P49458 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.1□□□□□ -2.39
SRP9P49458 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.09□□□□□ -2.4
SRP9P49458 RNU6-45P-201ENST00000384471 107 ntBASIC0.09□□□□□ -2.4
SRP9P49458 SNORA16.2-201ENST00000390991 127 ntBASIC0.09□□□□□ -2.4
SRP9P49458 RNA5SP467-201ENST00000391274 118 ntBASIC0.09□□□□□ -2.4
SRP9P49458 RNU6-293P-201ENST00000411259 106 ntBASIC0.09□□□□□ -2.4
SRP9P49458 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.09□□□□□ -2.4
SRP9P49458 AC019070.1-201ENST00000415008 1024 ntBASIC0.09□□□□□ -2.4
SRP9P49458 USP9YP21-201ENST00000420603 432 ntBASIC0.09□□□□□ -2.4
SRP9P49458 RPL39P39-201ENST00000455840 151 ntBASIC0.09□□□□□ -2.4
SRP9P49458 AC007547.1-201ENST00000462177 490 ntBASIC0.09□□□□□ -2.4
SRP9P49458 SRRM1P2-201ENST00000464531 1192 ntBASIC0.09□□□□□ -2.4
SRP9P49458 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.09□□□□□ -2.4
SRP9P49458 ADI1P3-201ENST00000549509 470 ntBASIC0.09□□□□□ -2.4
SRP9P49458 EIF4A1P12-201ENST00000551910 141 ntBASIC0.09□□□□□ -2.4
SRP9P49458 MIR4514-201ENST00000581410 57 ntBASIC0.09□□□□□ -2.4
SRP9P49458 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.09□□□□□ -2.4
SRP9P49458 AC064872.1-201ENST00000604823 1072 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms