Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 FGF7P1-201ENST00000582820 288 ntBASIC2.13□□□□□ -2.07
LHX1P48742 AC124303.1-201ENST00000605703 360 ntBASIC2.13□□□□□ -2.07
LHX1P48742 AL022345.1-201ENST00000607292 135 ntBASIC2.13□□□□□ -2.07
LHX1P48742 PCGEM1.1-201ENST00000613431 131 ntBASIC2.13□□□□□ -2.07
LHX1P48742 AL161423.1-201ENST00000613700 262 ntBASIC2.13□□□□□ -2.07
LHX1P48742 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LHX1P48742 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LHX1P48742 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LHX1P48742 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.12□□□□□ -2.07
LHX1P48742 CBX3P1-201ENST00000325243 554 ntBASIC2.12□□□□□ -2.07
LHX1P48742 Y_RNA.160-201ENST00000363677 92 ntBASIC2.12□□□□□ -2.07
LHX1P48742 RNU6-743P-201ENST00000364151 106 ntBASIC2.12□□□□□ -2.07
LHX1P48742 SNORD32B-201ENST00000364460 84 ntBASIC2.12□□□□□ -2.07
LHX1P48742 Y_RNA.301-201ENST00000364990 103 ntBASIC2.12□□□□□ -2.07
LHX1P48742 RNU6-1286P-201ENST00000383871 107 ntBASIC2.12□□□□□ -2.07
LHX1P48742 SNORA29-201ENST00000384183 140 ntBASIC2.12□□□□□ -2.07
LHX1P48742 RNU6-611P-201ENST00000384276 104 ntBASIC2.12□□□□□ -2.07
LHX1P48742 RNU6-784P-201ENST00000384330 106 ntBASIC2.12□□□□□ -2.07
LHX1P48742 RNU6-876P-201ENST00000391295 104 ntBASIC2.12□□□□□ -2.07
LHX1P48742 MTND3P8-201ENST00000412909 339 ntBASIC2.12□□□□□ -2.07
LHX1P48742 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.12□□□□□ -2.07
LHX1P48742 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.12□□□□□ -2.07
LHX1P48742 MTCO3P46-201ENST00000425787 232 ntBASIC2.12□□□□□ -2.07
LHX1P48742 HMGN2P3-201ENST00000433603 273 ntBASIC2.12□□□□□ -2.07
LHX1P48742 HMGN2P5-201ENST00000436882 273 ntBASIC2.12□□□□□ -2.07
LHX1P48742 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.12□□□□□ -2.07
LHX1P48742 ACA59.1-201ENST00000515966 143 ntBASIC2.12□□□□□ -2.07
LHX1P48742 RNU1-40P-201ENST00000516816 164 ntBASIC2.12□□□□□ -2.07
LHX1P48742 RNU1-97P-201ENST00000516872 164 ntBASIC2.12□□□□□ -2.07
LHX1P48742 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.12□□□□□ -2.07
LHX1P48742 AC109446.1-201ENST00000566172 220 ntBASIC2.12□□□□□ -2.07
LHX1P48742 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.12□□□□□ -2.07
LHX1P48742 MIR4790-201ENST00000577799 79 ntBASIC2.12□□□□□ -2.07
LHX1P48742 AC026271.5-201ENST00000577873 130 ntBASIC2.12□□□□□ -2.07
LHX1P48742 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.12□□□□□ -2.07
LHX1P48742 MIR6840-201ENST00000611937 71 ntBASIC2.12□□□□□ -2.07
LHX1P48742 AC022202.1-201ENST00000613515 211 ntBASIC2.12□□□□□ -2.07
LHX1P48742 AL132822.1-201ENST00000617063 513 ntBASIC2.12□□□□□ -2.07
LHX1P48742 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.12□□□□□ -2.07
LHX1P48742 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
LHX1P48742 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
LHX1P48742 AC233981.2-201ENST00000611524 1614 ntBASIC2.11□□□□□ -2.07
LHX1P48742 RNU6-378P-201ENST00000384324 107 ntBASIC2.11□□□□□ -2.07
LHX1P48742 RNU6-306P-201ENST00000384617 107 ntBASIC2.11□□□□□ -2.07
LHX1P48742 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LHX1P48742 RNA5SP494-201ENST00000410653 129 ntBASIC2.11□□□□□ -2.07
LHX1P48742 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.11□□□□□ -2.07
LHX1P48742 MTND1P17-201ENST00000448961 204 ntBASIC2.11□□□□□ -2.07
LHX1P48742 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.11□□□□□ -2.07
LHX1P48742 snoU13.6-201ENST00000458785 104 ntBASIC2.11□□□□□ -2.07
LHX1P48742 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.11□□□□□ -2.07
LHX1P48742 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.11□□□□□ -2.07
LHX1P48742 MRPS36P4-201ENST00000534436 298 ntBASIC2.11□□□□□ -2.07
LHX1P48742 EIF4A1P12-201ENST00000551910 141 ntBASIC2.11□□□□□ -2.07
LHX1P48742 MIR5089-201ENST00000580047 84 ntBASIC2.11□□□□□ -2.07
LHX1P48742 AL031274.2-201ENST00000599419 203 ntBASIC2.11□□□□□ -2.07
LHX1P48742 SNRPGP17-201ENST00000603780 214 ntBASIC2.11□□□□□ -2.07
LHX1P48742 AP000654.2-201ENST00000605633 586 ntBASIC2.11□□□□□ -2.07
LHX1P48742 AC005520.5-201ENST00000613926 164 ntBASIC2.11□□□□□ -2.07
LHX1P48742 RNA5SP37-201ENST00000365420 130 ntBASIC2.1□□□□□ -2.07
LHX1P48742 RNU6-26P-201ENST00000383985 107 ntBASIC2.1□□□□□ -2.07
LHX1P48742 SNORA6-201ENST00000384033 151 ntBASIC2.1□□□□□ -2.07
LHX1P48742 MT-TL1-201ENST00000386347 75 ntBASIC2.1□□□□□ -2.07
LHX1P48742 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
LHX1P48742 AL137159.1-201ENST00000452808 512 ntBASIC2.1□□□□□ -2.07
LHX1P48742 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.1□□□□□ -2.07
LHX1P48742 AC132942.1-201ENST00000486753 483 ntBASIC2.1□□□□□ -2.07
LHX1P48742 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.1□□□□□ -2.07
LHX1P48742 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.1□□□□□ -2.07
LHX1P48742 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.1□□□□□ -2.07
LHX1P48742 MIR449C-201ENST00000516047 92 ntBASIC2.1□□□□□ -2.07
LHX1P48742 RNA5SP182-201ENST00000516064 82 ntBASIC2.1□□□□□ -2.07
LHX1P48742 Y_RNA.682-201ENST00000516457 100 ntBASIC2.1□□□□□ -2.07
LHX1P48742 RNU7-193P-201ENST00000516723 65 ntBASIC2.1□□□□□ -2.07
LHX1P48742 RNA5SP137-201ENST00000516833 135 ntBASIC2.1□□□□□ -2.07
LHX1P48742 RNU1-54P-201ENST00000517181 120 ntBASIC2.1□□□□□ -2.07
LHX1P48742 AC233702.2-202ENST00000562547 291 ntBASIC2.1□□□□□ -2.07
LHX1P48742 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.1□□□□□ -2.07
LHX1P48742 AC009318.2-201ENST00000610917 651 ntBASIC2.1□□□□□ -2.07
LHX1P48742 MIR1248-201ENST00000629190 106 ntBASIC2.1□□□□□ -2.07
LHX1P48742 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LHX1P48742 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
LHX1P48742 AP006437.1-201ENST00000641440 3685 ntBASIC2.1□□□□□ -2.07
LHX1P48742 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
LHX1P48742 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LHX1P48742 RNU5B-2P-201ENST00000363036 113 ntBASIC2.09□□□□□ -2.07
LHX1P48742 RNU6-767P-201ENST00000384132 107 ntBASIC2.09□□□□□ -2.07
LHX1P48742 MIR504-201ENST00000385065 83 ntBASIC2.09□□□□□ -2.07
LHX1P48742 FGF7P8-201ENST00000402994 292 ntBASIC2.09□□□□□ -2.07
LHX1P48742 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.09□□□□□ -2.07
LHX1P48742 AC046134.1-201ENST00000514454 666 ntBASIC2.09□□□□□ -2.07
LHX1P48742 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
LHX1P48742 AC009127.3-201ENST00000570531 403 ntBASIC2.09□□□□□ -2.07
LHX1P48742 AC104984.5-201ENST00000586878 94 ntBASIC2.09□□□□□ -2.07
LHX1P48742 AC002984.1-201ENST00000591692 448 ntBASIC2.09□□□□□ -2.07
LHX1P48742 AL133216.2-202ENST00000634512 349 ntBASIC2.09□□□□□ -2.07
LHX1P48742 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LHX1P48742 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
LHX1P48742 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LHX1P48742 Y_RNA.279-201ENST00000364763 95 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms