Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.58□□□□□ -2
SOX2P48431 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.58□□□□□ -2
SOX2P48431 COX6CP5-201ENST00000527162 228 ntBASIC2.58□□□□□ -2
SOX2P48431 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.58□□□□□ -2
SOX2P48431 AC093023.1-201ENST00000547375 507 ntBASIC2.58□□□□□ -2
SOX2P48431 EIF4A1P12-201ENST00000551910 141 ntBASIC2.58□□□□□ -2
SOX2P48431 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.58□□□□□ -2
SOX2P48431 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.58□□□□□ -2
SOX2P48431 AC010329.5-201ENST00000623497 2174 ntBASIC2.58□□□□□ -2
SOX2P48431 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.58□□□□□ -2
SOX2P48431 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.58□□□□□ -2
SOX2P48431 AL049781.1-201ENST00000623195 3585 ntBASIC2.57□□□□□ -2
SOX2P48431 BX322639.1-202ENST00000423987 2213 ntBASIC2.57□□□□□ -2
SOX2P48431 SET-203ENST00000372688 801 ntTSL 2 BASIC2.57□□□□□ -2
SOX2P48431 Y_RNA.458-201ENST00000384240 102 ntBASIC2.57□□□□□ -2
SOX2P48431 RNU6-318P-201ENST00000384283 103 ntBASIC2.57□□□□□ -2
SOX2P48431 RNU6-713P-201ENST00000384761 107 ntBASIC2.57□□□□□ -2
SOX2P48431 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.57□□□□□ -2
SOX2P48431 RPL21P1-201ENST00000399532 476 ntBASIC2.57□□□□□ -2
SOX2P48431 MICF-203ENST00000432679 129 ntBASIC2.57□□□□□ -2
SOX2P48431 AC112220.1-201ENST00000434628 355 ntBASIC2.57□□□□□ -2
SOX2P48431 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.57□□□□□ -2
SOX2P48431 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.57□□□□□ -2
SOX2P48431 SNORA84-201ENST00000459229 133 ntBASIC2.57□□□□□ -2
SOX2P48431 AC073901.1-201ENST00000462471 408 ntBASIC2.57□□□□□ -2
SOX2P48431 AC140059.1-201ENST00000489238 361 ntBASIC2.57□□□□□ -2
SOX2P48431 AC067942.3-201ENST00000512025 362 ntBASIC2.57□□□□□ -2
SOX2P48431 RNU6-1012P-201ENST00000516606 109 ntBASIC2.57□□□□□ -2
SOX2P48431 RN7SKP49-201ENST00000516675 260 ntBASIC2.57□□□□□ -2
SOX2P48431 RNU6-897P-201ENST00000517135 105 ntBASIC2.57□□□□□ -2
SOX2P48431 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
SOX2P48431 MIR3158-1-201ENST00000583596 81 ntBASIC2.57□□□□□ -2
SOX2P48431 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
SOX2P48431 AC125232.2-201ENST00000592457 143 ntBASIC2.57□□□□□ -2
SOX2P48431 SNRPGP20-201ENST00000604477 205 ntBASIC2.57□□□□□ -2
SOX2P48431 Y_RNA.772-201ENST00000606692 102 ntBASIC2.57□□□□□ -2
SOX2P48431 AC006133.1-201ENST00000617106 264 ntBASIC2.57□□□□□ -2
SOX2P48431 MIR7157-201ENST00000635801 60 ntBASIC2.57□□□□□ -2
SOX2P48431 MIR622-201ENST00000638396 96 ntBASIC2.57□□□□□ -2
SOX2P48431 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
SOX2P48431 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.57□□□□□ -2
SOX2P48431 AC138915.1-201ENST00000565427 1685 ntBASIC2.57□□□□□ -2
SOX2P48431 RNA5SP361-201ENST00000362686 118 ntBASIC2.56□□□□□ -2
SOX2P48431 RNU1-35P-201ENST00000362782 153 ntBASIC2.56□□□□□ -2
SOX2P48431 Y_RNA.214-201ENST00000364201 112 ntBASIC2.56□□□□□ -2
SOX2P48431 SNORA68.1-201ENST00000364537 132 ntBASIC2.56□□□□□ -2
SOX2P48431 RNU6-26P-201ENST00000383985 107 ntBASIC2.56□□□□□ -2
SOX2P48431 RNU6-245P-201ENST00000384020 107 ntBASIC2.56□□□□□ -2
SOX2P48431 Y_RNA.439-201ENST00000384119 94 ntBASIC2.56□□□□□ -2
SOX2P48431 RNU6-574P-201ENST00000384265 107 ntBASIC2.56□□□□□ -2
SOX2P48431 RNU6-611P-201ENST00000384276 104 ntBASIC2.56□□□□□ -2
SOX2P48431 SNORA46.1-201ENST00000391069 153 ntBASIC2.56□□□□□ -2
SOX2P48431 SNORD88.1-201ENST00000408684 91 ntBASIC2.56□□□□□ -2
SOX2P48431 RNA5SP344-201ENST00000411081 104 ntBASIC2.56□□□□□ -2
SOX2P48431 RNA5SP492-201ENST00000411330 114 ntBASIC2.56□□□□□ -2
SOX2P48431 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.56□□□□□ -2
SOX2P48431 RPS29P6-201ENST00000438196 145 ntBASIC2.56□□□□□ -2
SOX2P48431 AC006028.1-201ENST00000438379 402 ntBASIC2.56□□□□□ -2
SOX2P48431 DYNLT3P2-201ENST00000442517 295 ntBASIC2.56□□□□□ -2
SOX2P48431 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.56□□□□□ -2
SOX2P48431 RNU6-1143P-201ENST00000516125 104 ntBASIC2.56□□□□□ -2
SOX2P48431 RNY3P15-201ENST00000516297 97 ntBASIC2.56□□□□□ -2
SOX2P48431 SNORA25.14-201ENST00000516481 132 ntBASIC2.56□□□□□ -2
SOX2P48431 SNORA67.7-201ENST00000516664 135 ntBASIC2.56□□□□□ -2
SOX2P48431 SCARNA3-201ENST00000517097 143 ntBASIC2.56□□□□□ -2
SOX2P48431 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.56□□□□□ -2
SOX2P48431 MIR4503-201ENST00000582187 83 ntBASIC2.56□□□□□ -2
SOX2P48431 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.56□□□□□ -2
SOX2P48431 AC107871.2-201ENST00000612894 502 ntBASIC2.56□□□□□ -2
SOX2P48431 AC010205.1-201ENST00000616668 449 ntBASIC2.56□□□□□ -2
SOX2P48431 AC130454.1-201ENST00000622948 401 ntBASIC2.56□□□□□ -2
SOX2P48431 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.56□□□□□ -2
SOX2P48431 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.55□□□□□ -2
SOX2P48431 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SOX2P48431 Y_RNA.183-201ENST00000363882 113 ntBASIC2.55□□□□□ -2
SOX2P48431 RNU6-770P-201ENST00000363929 105 ntBASIC2.55□□□□□ -2
SOX2P48431 Y_RNA.452-201ENST00000384202 108 ntBASIC2.55□□□□□ -2
SOX2P48431 MIR329-1-201ENST00000385028 80 ntBASIC2.55□□□□□ -2
SOX2P48431 MIR29B2-201ENST00000385055 81 ntBASIC2.55□□□□□ -2
SOX2P48431 SNORD12B-201ENST00000410433 91 ntBASIC2.55□□□□□ -2
SOX2P48431 RNU6-1328P-201ENST00000410938 106 ntBASIC2.55□□□□□ -2
SOX2P48431 RNU6-1001P-201ENST00000411265 100 ntBASIC2.55□□□□□ -2
SOX2P48431 ELOCP20-201ENST00000422460 345 ntBASIC2.55□□□□□ -2
SOX2P48431 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.55□□□□□ -2
SOX2P48431 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.55□□□□□ -2
SOX2P48431 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.55□□□□□ -2
SOX2P48431 AL731563.1-201ENST00000442202 214 ntBASIC2.55□□□□□ -2
SOX2P48431 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.55□□□□□ -2
SOX2P48431 AC117440.1-201ENST00000474107 571 ntBASIC2.55□□□□□ -2
SOX2P48431 AC103975.1-201ENST00000482506 483 ntBASIC2.55□□□□□ -2
SOX2P48431 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.55□□□□□ -2
SOX2P48431 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.55□□□□□ -2
SOX2P48431 AL161670.1-201ENST00000554348 137 ntBASIC2.55□□□□□ -2
SOX2P48431 AC026470.2-201ENST00000561492 181 ntBASIC2.55□□□□□ -2
SOX2P48431 MIR4659A-201ENST00000580269 81 ntBASIC2.55□□□□□ -2
SOX2P48431 MIR3199-1-201ENST00000582434 88 ntBASIC2.55□□□□□ -2
SOX2P48431 MIR3149-201ENST00000584629 83 ntBASIC2.55□□□□□ -2
SOX2P48431 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.55□□□□□ -2
SOX2P48431 AC008739.3-201ENST00000603262 127 ntBASIC2.55□□□□□ -2
SOX2P48431 AC010999.1-201ENST00000611856 324 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms