Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 RPL39P38-201ENST00000467018 153 ntBASIC0.59□□□□□ -2.31
RPL28P46779 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.59□□□□□ -2.31
RPL28P46779 AC091435.1-201ENST00000505442 584 ntBASIC0.59□□□□□ -2.31
RPL28P46779 ARL2BPP4-201ENST00000506854 471 ntBASIC0.59□□□□□ -2.31
RPL28P46779 RNU6-1053P-201ENST00000515930 101 ntBASIC0.59□□□□□ -2.31
RPL28P46779 SCARNA16.2-201ENST00000516520 172 ntBASIC0.59□□□□□ -2.31
RPL28P46779 SNORA70.22-201ENST00000517160 124 ntBASIC0.59□□□□□ -2.31
RPL28P46779 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.59□□□□□ -2.31
RPL28P46779 DEFB131C-201ENST00000528817 165 ntBASIC0.59□□□□□ -2.31
RPL28P46779 AC136932.1-201ENST00000574771 208 ntBASIC0.59□□□□□ -2.31
RPL28P46779 AC008088.1-201ENST00000580993 280 ntBASIC0.59□□□□□ -2.31
RPL28P46779 AC013244.2-201ENST00000603396 103 ntBASIC0.59□□□□□ -2.31
RPL28P46779 AP001836.1-201ENST00000604675 523 ntBASIC0.59□□□□□ -2.31
RPL28P46779 MIR6857-201ENST00000613267 93 ntBASIC0.59□□□□□ -2.31
RPL28P46779 U6.114-201ENST00000636407 96 ntBASIC0.59□□□□□ -2.31
RPL28P46779 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
RPL28P46779 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.32
RPL28P46779 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.58□□□□□ -2.32
RPL28P46779 RNU6-562P-201ENST00000362731 107 ntBASIC0.58□□□□□ -2.32
RPL28P46779 RNU6-1287P-201ENST00000362914 107 ntBASIC0.58□□□□□ -2.32
RPL28P46779 SNORA33-201ENST00000363664 130 ntBASIC0.58□□□□□ -2.32
RPL28P46779 SNORD114-2-201ENST00000363953 78 ntBASIC0.58□□□□□ -2.32
RPL28P46779 Y_RNA.480-201ENST00000384364 102 ntBASIC0.58□□□□□ -2.32
RPL28P46779 Y_RNA.504-201ENST00000384481 104 ntBASIC0.58□□□□□ -2.32
RPL28P46779 RNU6-1060P-201ENST00000384664 107 ntBASIC0.58□□□□□ -2.32
RPL28P46779 MIR515-2-201ENST00000384883 83 ntBASIC0.58□□□□□ -2.32
RPL28P46779 MIR515-1-201ENST00000384884 83 ntBASIC0.58□□□□□ -2.32
RPL28P46779 MIR1283-1-201ENST00000408494 87 ntBASIC0.58□□□□□ -2.32
RPL28P46779 AC098592.1-201ENST00000419352 333 ntBASIC0.58□□□□□ -2.32
RPL28P46779 AC012306.1-201ENST00000423267 114 ntBASIC0.58□□□□□ -2.32
RPL28P46779 RAB28P5-201ENST00000427490 651 ntBASIC0.58□□□□□ -2.32
RPL28P46779 Z82205.1-201ENST00000428456 297 ntBASIC0.58□□□□□ -2.32
RPL28P46779 RPS4XP11-201ENST00000446897 772 ntBASIC0.58□□□□□ -2.32
RPL28P46779 RPS27P1-201ENST00000450552 247 ntBASIC0.58□□□□□ -2.32
RPL28P46779 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.58□□□□□ -2.32
RPL28P46779 HMGN1P12-201ENST00000499125 195 ntBASIC0.58□□□□□ -2.32
RPL28P46779 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.58□□□□□ -2.32
RPL28P46779 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.58□□□□□ -2.32
RPL28P46779 SNORA25.17-201ENST00000517184 124 ntBASIC0.58□□□□□ -2.32
RPL28P46779 AP003072.2-201ENST00000527756 676 ntBASIC0.58□□□□□ -2.32
RPL28P46779 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.58□□□□□ -2.32
RPL28P46779 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.58□□□□□ -2.32
RPL28P46779 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.58□□□□□ -2.32
RPL28P46779 AC008751.2-201ENST00000597885 980 ntBASIC0.58□□□□□ -2.32
RPL28P46779 BNIP3P10-201ENST00000605360 577 ntBASIC0.58□□□□□ -2.32
RPL28P46779 AC211469.2-201ENST00000605461 205 ntBASIC0.58□□□□□ -2.32
RPL28P46779 AL021879.1-201ENST00000611756 288 ntBASIC0.58□□□□□ -2.32
RPL28P46779 AC022418.1-201ENST00000624118 445 ntBASIC0.58□□□□□ -2.32
RPL28P46779 AC007671.2-201ENST00000637344 619 ntBASIC0.58□□□□□ -2.32
RPL28P46779 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
RPL28P46779 snoU2-30.2-201ENST00000362805 70 ntBASIC0.57□□□□□ -2.32
RPL28P46779 SNORA18.2-201ENST00000383865 132 ntBASIC0.57□□□□□ -2.32
RPL28P46779 MIR222-201ENST00000384992 110 ntBASIC0.57□□□□□ -2.32
RPL28P46779 MIR513B-201ENST00000385136 84 ntBASIC0.57□□□□□ -2.32
RPL28P46779 AP000275.1-201ENST00000411943 390 ntBASIC0.57□□□□□ -2.32
RPL28P46779 AC006461.1-201ENST00000412637 326 ntBASIC0.57□□□□□ -2.32
RPL28P46779 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.57□□□□□ -2.32
RPL28P46779 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.57□□□□□ -2.32
RPL28P46779 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.57□□□□□ -2.32
RPL28P46779 HSPE1P13-201ENST00000451143 297 ntBASIC0.57□□□□□ -2.32
RPL28P46779 AL162395.1-201ENST00000457882 422 ntBASIC0.57□□□□□ -2.32
RPL28P46779 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.57□□□□□ -2.32
RPL28P46779 AC079382.1-201ENST00000493346 557 ntBASIC0.57□□□□□ -2.32
RPL28P46779 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.57□□□□□ -2.32
RPL28P46779 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.57□□□□□ -2.32
RPL28P46779 ACA64.5-201ENST00000516207 127 ntBASIC0.57□□□□□ -2.32
RPL28P46779 RNU2-46P-201ENST00000517038 113 ntBASIC0.57□□□□□ -2.32
RPL28P46779 SUMO2P16-201ENST00000519475 264 ntBASIC0.57□□□□□ -2.32
RPL28P46779 AC103996.1-201ENST00000555468 102 ntBASIC0.57□□□□□ -2.32
RPL28P46779 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.57□□□□□ -2.32
RPL28P46779 TPRKBP2-201ENST00000565969 475 ntBASIC0.57□□□□□ -2.32
RPL28P46779 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.57□□□□□ -2.32
RPL28P46779 MIR4775-201ENST00000581168 75 ntBASIC0.57□□□□□ -2.32
RPL28P46779 AC021506.2-201ENST00000612354 169 ntBASIC0.57□□□□□ -2.32
RPL28P46779 MIR7844-201ENST00000616161 122 ntBASIC0.57□□□□□ -2.32
RPL28P46779 AL078595.3-201ENST00000623815 1166 ntBASIC0.57□□□□□ -2.32
RPL28P46779 RNU6-827P-201ENST00000365553 106 ntBASIC0.56□□□□□ -2.32
RPL28P46779 RNU6-1235P-201ENST00000384559 107 ntBASIC0.56□□□□□ -2.32
RPL28P46779 MIR532-201ENST00000385025 91 ntBASIC0.56□□□□□ -2.32
RPL28P46779 MIR620-201ENST00000385232 95 ntBASIC0.56□□□□□ -2.32
RPL28P46779 MIR100-201ENST00000385259 80 ntBASIC0.56□□□□□ -2.32
RPL28P46779 MIR454-201ENST00000390180 115 ntBASIC0.56□□□□□ -2.32
RPL28P46779 RPL21P1-201ENST00000399532 476 ntBASIC0.56□□□□□ -2.32
RPL28P46779 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.56□□□□□ -2.32
RPL28P46779 RNU6-321P-201ENST00000410912 106 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.56□□□□□ -2.32
RPL28P46779 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.56□□□□□ -2.32
RPL28P46779 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.56□□□□□ -2.32
RPL28P46779 AL596276.1-201ENST00000434465 418 ntBASIC0.56□□□□□ -2.32
RPL28P46779 HMGN2P34-201ENST00000437647 269 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AC073614.1-201ENST00000438690 650 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.56□□□□□ -2.32
RPL28P46779 AC244505.5-201ENST00000443639 207 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.56□□□□□ -2.32
RPL28P46779 AL031274.1-201ENST00000450334 232 ntBASIC0.56□□□□□ -2.32
RPL28P46779 RNU6-498P-201ENST00000459468 107 ntBASIC0.56□□□□□ -2.32
RPL28P46779 HMGN1P7-201ENST00000491722 313 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AC005840.1-201ENST00000498412 377 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AC103851.1-201ENST00000506833 274 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AK3P2-201ENST00000507976 429 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms