Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC087683.1-201ENST00000591187 441 ntBASIC1.45□□□□□ -2.18
RORAP35398 AC010900.2-201ENST00000604508 210 ntBASIC1.45□□□□□ -2.18
RORAP35398 AP001485.1-201ENST00000604799 199 ntBASIC1.45□□□□□ -2.18
RORAP35398 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.45□□□□□ -2.18
RORAP35398 AP000648.3-201ENST00000623539 4507 ntBASIC1.45□□□□□ -2.18
RORAP35398 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.45□□□□□ -2.18
RORAP35398 AC245060.5-201ENST00000610778 3293 ntBASIC1.44□□□□□ -2.18
RORAP35398 RNU4-13P-201ENST00000364019 141 ntBASIC1.44□□□□□ -2.18
RORAP35398 RNU4-20P-201ENST00000365601 151 ntBASIC1.44□□□□□ -2.18
RORAP35398 Y_RNA.504-201ENST00000384481 104 ntBASIC1.44□□□□□ -2.18
RORAP35398 Y_RNA.582-201ENST00000391023 95 ntBASIC1.44□□□□□ -2.18
RORAP35398 RNU6-321P-201ENST00000410912 106 ntBASIC1.44□□□□□ -2.18
RORAP35398 AL663109.1-201ENST00000411498 844 ntBASIC1.44□□□□□ -2.18
RORAP35398 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.44□□□□□ -2.18
RORAP35398 AL121601.2-201ENST00000438019 707 ntBASIC1.44□□□□□ -2.18
RORAP35398 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.44□□□□□ -2.18
RORAP35398 RNU7-138P-201ENST00000459479 64 ntBASIC1.44□□□□□ -2.18
RORAP35398 RPS29P27-201ENST00000463711 170 ntBASIC1.44□□□□□ -2.18
RORAP35398 AC130509.1-201ENST00000464158 433 ntBASIC1.44□□□□□ -2.18
RORAP35398 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.44□□□□□ -2.18
RORAP35398 RNU6-1038P-201ENST00000516516 104 ntBASIC1.44□□□□□ -2.18
RORAP35398 SNORA31.24-201ENST00000517232 57 ntBASIC1.44□□□□□ -2.18
RORAP35398 MTND4P7-201ENST00000523876 130 ntBASIC1.44□□□□□ -2.18
RORAP35398 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.44□□□□□ -2.18
RORAP35398 AC015720.1-201ENST00000565251 277 ntBASIC1.44□□□□□ -2.18
RORAP35398 MIR3923-201ENST00000579521 83 ntBASIC1.44□□□□□ -2.18
RORAP35398 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.44□□□□□ -2.18
RORAP35398 AC004223.2-201ENST00000590309 544 ntBASIC1.44□□□□□ -2.18
RORAP35398 AL359821.1-201ENST00000605519 182 ntBASIC1.44□□□□□ -2.18
RORAP35398 AC017083.3-201ENST00000609955 700 ntBASIC1.44□□□□□ -2.18
RORAP35398 uc_338.5-201ENST00000611839 155 ntBASIC1.44□□□□□ -2.18
RORAP35398 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.44□□□□□ -2.18
RORAP35398 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.44□□□□□ -2.18
RORAP35398 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
RORAP35398 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RORAP35398 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
RORAP35398 Y_RNA.167-201ENST00000363735 109 ntBASIC1.43□□□□□ -2.18
RORAP35398 RNU6-1119P-201ENST00000384349 108 ntBASIC1.43□□□□□ -2.18
RORAP35398 AL606923.1-201ENST00000406616 190 ntBASIC1.43□□□□□ -2.18
RORAP35398 RNU6-174P-201ENST00000410406 106 ntBASIC1.43□□□□□ -2.18
RORAP35398 RNU4-55P-201ENST00000410731 137 ntBASIC1.43□□□□□ -2.18
RORAP35398 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
RORAP35398 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.43□□□□□ -2.18
RORAP35398 AC123900.1-201ENST00000420390 96 ntBASIC1.43□□□□□ -2.18
RORAP35398 NCOR1P3-201ENST00000420479 303 ntBASIC1.43□□□□□ -2.18
RORAP35398 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.43□□□□□ -2.18
RORAP35398 MTCO2P3-201ENST00000442543 421 ntBASIC1.43□□□□□ -2.18
RORAP35398 RNU1-131P-201ENST00000458943 161 ntBASIC1.43□□□□□ -2.18
RORAP35398 TOMM22P6-201ENST00000465035 409 ntBASIC1.43□□□□□ -2.18
RORAP35398 MTCO3P38-201ENST00000468910 766 ntBASIC1.43□□□□□ -2.18
RORAP35398 AC023790.1-201ENST00000482174 347 ntBASIC1.43□□□□□ -2.18
RORAP35398 AC010409.1-201ENST00000487382 476 ntBASIC1.43□□□□□ -2.18
RORAP35398 AC008628.2-201ENST00000502605 298 ntBASIC1.43□□□□□ -2.18
RORAP35398 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.43□□□□□ -2.18
RORAP35398 AC010493.1-201ENST00000513479 292 ntBASIC1.43□□□□□ -2.18
RORAP35398 Y_RNA.688-201ENST00000516565 95 ntBASIC1.43□□□□□ -2.18
RORAP35398 RNU6-1098P-201ENST00000516772 96 ntBASIC1.43□□□□□ -2.18
RORAP35398 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.43□□□□□ -2.18
RORAP35398 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.43□□□□□ -2.18
RORAP35398 MIR4422-201ENST00000581938 83 ntBASIC1.43□□□□□ -2.18
RORAP35398 RN7SKP299-201ENST00000606679 301 ntBASIC1.43□□□□□ -2.18
RORAP35398 AP001330.5-201ENST00000607176 411 ntBASIC1.43□□□□□ -2.18
RORAP35398 AC064836.2-201ENST00000609491 462 ntBASIC1.43□□□□□ -2.18
RORAP35398 MIR8074-201ENST00000615081 81 ntBASIC1.43□□□□□ -2.18
RORAP35398 AC068792.1-201ENST00000621354 417 ntBASIC1.43□□□□□ -2.18
RORAP35398 U3.9-201ENST00000363823 204 ntBASIC1.42□□□□□ -2.18
RORAP35398 Y_RNA.296-201ENST00000364930 108 ntBASIC1.42□□□□□ -2.18
RORAP35398 Y_RNA.378-201ENST00000365652 113 ntBASIC1.42□□□□□ -2.18
RORAP35398 RNU6-38P-201ENST00000384085 107 ntBASIC1.42□□□□□ -2.18
RORAP35398 RNU6-439P-201ENST00000384188 106 ntBASIC1.42□□□□□ -2.18
RORAP35398 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
RORAP35398 MTCO3P41-201ENST00000414801 328 ntBASIC1.42□□□□□ -2.18
RORAP35398 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.42□□□□□ -2.18
RORAP35398 SNRPEP8-201ENST00000442866 260 ntBASIC1.42□□□□□ -2.18
RORAP35398 AL357134.1-201ENST00000445848 426 ntBASIC1.42□□□□□ -2.18
RORAP35398 AL163540.1-201ENST00000485382 386 ntBASIC1.42□□□□□ -2.18
RORAP35398 RNU6-567P-201ENST00000516746 107 ntBASIC1.42□□□□□ -2.18
RORAP35398 CENPUP1-201ENST00000526649 1202 ntBASIC1.42□□□□□ -2.18
RORAP35398 DEFB131C-201ENST00000528817 165 ntBASIC1.42□□□□□ -2.18
RORAP35398 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.42□□□□□ -2.18
RORAP35398 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.42□□□□□ -2.18
RORAP35398 SUB1P4-201ENST00000566062 339 ntBASIC1.42□□□□□ -2.18
RORAP35398 MTND1P15-201ENST00000579262 949 ntBASIC1.42□□□□□ -2.18
RORAP35398 AC005786.1-201ENST00000588553 154 ntBASIC1.42□□□□□ -2.18
RORAP35398 AC009994.1-201ENST00000606889 253 ntBASIC1.42□□□□□ -2.18
RORAP35398 AC005520.5-201ENST00000613926 164 ntBASIC1.42□□□□□ -2.18
RORAP35398 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
RORAP35398 AC103705.1-201ENST00000619013 241 ntBASIC1.42□□□□□ -2.18
RORAP35398 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RORAP35398 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RORAP35398 Y_RNA.409-201ENST00000383990 98 ntBASIC1.41□□□□□ -2.18
RORAP35398 SNORA32.2-201ENST00000384049 122 ntBASIC1.41□□□□□ -2.18
RORAP35398 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
RORAP35398 AC139712.2-201ENST00000424302 339 ntBASIC1.41□□□□□ -2.18
RORAP35398 MTCO3P46-201ENST00000425787 232 ntBASIC1.41□□□□□ -2.18
RORAP35398 TPTE2P5-203ENST00000458118 728 ntBASIC1.41□□□□□ -2.18
RORAP35398 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
RORAP35398 snoU13.9-201ENST00000458927 103 ntBASIC1.41□□□□□ -2.18
RORAP35398 AC114801.2-201ENST00000503825 781 ntBASIC1.41□□□□□ -2.18
RORAP35398 Y_RNA.675-201ENST00000516389 149 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms