Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNU6-29P-201ENST00000384637 107 ntBASIC0.57□□□□□ -2.32
COL4A5P29400 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
COL4A5P29400 RNU6-607P-201ENST00000411283 108 ntBASIC0.57□□□□□ -2.32
COL4A5P29400 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.57□□□□□ -2.32
COL4A5P29400 AC099677.2-201ENST00000436385 175 ntBASIC0.57□□□□□ -2.32
COL4A5P29400 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.57□□□□□ -2.32
COL4A5P29400 GAPDHP17-201ENST00000449858 1001 ntBASIC0.57□□□□□ -2.32
COL4A5P29400 USP9YP25-201ENST00000457708 443 ntBASIC0.57□□□□□ -2.32
COL4A5P29400 AC145146.1-201ENST00000496370 254 ntBASIC0.57□□□□□ -2.32
COL4A5P29400 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
COL4A5P29400 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.57□□□□□ -2.32
COL4A5P29400 MTND2P31-201ENST00000512602 616 ntBASIC0.57□□□□□ -2.32
COL4A5P29400 AC105185.1-201ENST00000518705 535 ntBASIC0.57□□□□□ -2.32
COL4A5P29400 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.57□□□□□ -2.32
COL4A5P29400 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.57□□□□□ -2.32
COL4A5P29400 AL512310.8-201ENST00000550183 120 ntBASIC0.57□□□□□ -2.32
COL4A5P29400 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.57□□□□□ -2.32
COL4A5P29400 FAM157A-202ENST00000615155 405 ntBASIC0.57□□□□□ -2.32
COL4A5P29400 RNU6-78P-201ENST00000362897 107 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 RNU6-433P-201ENST00000363216 104 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 SNORD31B-201ENST00000364977 69 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 Y_RNA.302-201ENST00000364997 102 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 RNU6-439P-201ENST00000384188 106 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 Y_RNA.480-201ENST00000384364 102 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 MIR578-201ENST00000384828 96 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 RNU2-3P-201ENST00000410144 191 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.56□□□□□ -2.32
COL4A5P29400 HIGD1AP15-201ENST00000416198 280 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.56□□□□□ -2.32
COL4A5P29400 ELOCP4-201ENST00000420090 333 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AC013410.2-201ENST00000422627 201 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 RPS27AP14-201ENST00000422868 454 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
COL4A5P29400 MTND1P20-201ENST00000430341 950 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.56□□□□□ -2.32
COL4A5P29400 OR2AQ1P-201ENST00000451972 200 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.56□□□□□ -2.32
COL4A5P29400 AC112204.1-201ENST00000502591 103 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AC109479.2-201ENST00000517842 174 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AC090517.1-201ENST00000569307 266 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AC008521.1-201ENST00000587471 187 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AC008752.3-201ENST00000588113 712 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 HMGN1P30-201ENST00000589286 268 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AL359999.1-201ENST00000604513 294 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AL034555.1-201ENST00000604816 211 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AL022345.2-201ENST00000606307 135 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 PCGEM1.1-201ENST00000613431 131 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.56□□□□□ -2.32
COL4A5P29400 Y_RNA.18-201ENST00000362461 102 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 U3.4-201ENST00000363352 213 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 RNU1-96P-201ENST00000364163 162 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 RNU6-61P-201ENST00000365528 109 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 RNU6-641P-201ENST00000384006 107 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 RNU6-190P-201ENST00000384154 102 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 MIR558-201ENST00000384920 94 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 RNU6-1106P-201ENST00000390845 107 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 RNA5SP299-201ENST00000391203 116 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 Z95118.1-201ENST00000421372 247 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 MTND1P30-201ENST00000441241 901 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AC010587.1-201ENST00000505809 469 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 RNU6-123P-201ENST00000516163 102 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 SNORD60.2-201ENST00000516883 86 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 SNORA70.22-201ENST00000517160 124 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.56□□□□□ -2.32
COL4A5P29400 TMF1P1-201ENST00000576058 373 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 BNIP3P40-201ENST00000596017 556 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 MTND3P19-201ENST00000603825 345 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AC105129.3-201ENST00000605455 485 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 MIR3976-201ENST00000606807 139 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.56□□□□□ -2.32
COL4A5P29400 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
COL4A5P29400 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 uc_338.11-201ENST00000619132 160 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 AP000484.1-201ENST00000620067 1252 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 MIR5087-201ENST00000635826 76 ntBASIC0.56□□□□□ -2.32
COL4A5P29400 MTND4P14-201ENST00000435799 1354 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 MTND4P16-201ENST00000466108 1367 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 RNA5SP327-201ENST00000362494 101 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 U3.9-201ENST00000363823 204 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 SNORD32B-201ENST00000364460 84 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 SNORA72.2-201ENST00000365028 127 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
COL4A5P29400 MRPL35P1-201ENST00000404272 572 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 MTCYBP2-201ENST00000407745 171 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 RNA5SP201-201ENST00000410316 124 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 RNU6-757P-201ENST00000410334 100 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 AL022718.1-201ENST00000412004 84 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 AC002486.1-201ENST00000435098 391 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.55□□□□□ -2.32
COL4A5P29400 EXOSC3P1-201ENST00000448649 500 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.55□□□□□ -2.32
COL4A5P29400 ART2BP-201ENST00000453501 499 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.55□□□□□ -2.32
COL4A5P29400 TRBVA-201ENST00000498804 316 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 RNU1-86P-201ENST00000516108 154 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 SCARNA16.2-201ENST00000516520 172 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 RNU1-107P-201ENST00000516617 154 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 SUMO2P16-201ENST00000519475 264 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.55□□□□□ -2.32
COL4A5P29400 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms