Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RPL21P28-201ENST00000401418 483 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 Y_RNA.592-201ENST00000410274 109 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 AL160004.2-201ENST00000432935 350 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DOBP13765 AC108938.1-201ENST00000451204 136 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 RPS3P1-201ENST00000456781 192 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 RPL21P39-201ENST00000463605 483 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 TOMM22P6-201ENST00000465035 409 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 AC087190.1-201ENST00000484462 480 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 AC093591.1-201ENST00000491435 481 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 RPL21P16-201ENST00000495531 483 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 ANXA2P1-201ENST00000505539 926 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DOBP13765 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DOBP13765 SNORA25.11-201ENST00000515935 105 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 SNORA40.14-201ENST00000516543 86 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 RNU6-1198P-201ENST00000516904 67 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 MIR2355-201ENST00000517199 87 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 AC026241.1-201ENST00000517873 2142 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DOBP13765 AL360085.1-201ENST00000604713 532 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 AL138963.2-201ENST00000605137 226 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 AC005520.5-201ENST00000613926 164 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 AC138305.3-201ENST00000624988 240 ntBASIC2.31□□□□□ -2.04
HLA-DOBP13765 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HLA-DOBP13765 RNU6-859P-201ENST00000362728 107 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 Y_RNA.106-201ENST00000363189 100 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 SNORD115-8-201ENST00000363856 82 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 SNORD115-38-201ENST00000365037 82 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 RNU6-738P-201ENST00000384531 106 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 MIR592-201ENST00000384959 97 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HLA-DOBP13765 snosnR66.1-201ENST00000391095 99 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HLA-DOBP13765 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DOBP13765 ARL5AP4-201ENST00000430731 512 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DOBP13765 RPL23AP58-201ENST00000440453 469 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DOBP13765 AP000705.1-201ENST00000454567 350 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 AL353752.1-201ENST00000454946 260 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 AC112492.4-201ENST00000456549 352 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 snoU13.6-201ENST00000458785 104 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 RPL23AP70-201ENST00000483361 460 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 SRIP1-201ENST00000489235 288 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HLA-DOBP13765 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DOBP13765 RNA5SP282-201ENST00000516355 108 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 SCARNA3-201ENST00000517097 143 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 MIR4319-201ENST00000577285 85 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 AC005034.5-201ENST00000604219 466 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 SNORD58B-201ENST00000607313 66 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 U2.1-201ENST00000618978 145 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DOBP13765 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DOBP13765 MTND4P1-201ENST00000457501 1466 ntBASIC2.3□□□□□ -2.04
HLA-DOBP13765 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DOBP13765 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.29□□□□□ -2.04
HLA-DOBP13765 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DOBP13765 Y_RNA.145-201ENST00000363527 102 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 SNORA63C-201ENST00000364578 129 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 Y_RNA.319-201ENST00000365138 92 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 RNU6-541P-201ENST00000384709 110 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 MIR628-201ENST00000385229 95 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 U6atac.2-201ENST00000408644 118 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 RNA5SP201-201ENST00000410316 124 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 RNU6-1328P-201ENST00000410938 106 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 MTCO3P19-201ENST00000415864 321 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 AC114482.1-201ENST00000418010 247 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 CHEK2P4-201ENST00000450340 246 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 RNU7-87P-201ENST00000459343 62 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 RNU7-169P-201ENST00000459456 61 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.29□□□□□ -2.04
HLA-DOBP13765 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DOBP13765 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DOBP13765 AC096725.1-201ENST00000514266 313 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 RNA5SP356-201ENST00000515972 94 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 RNU6-327P-201ENST00000516270 127 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 RNU6-1045P-201ENST00000516321 107 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 Y_RNA.721-201ENST00000517207 102 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DOBP13765 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DOBP13765 HSBP1P1-201ENST00000555205 166 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DOBP13765 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DOBP13765 AC006600.1-201ENST00000572529 153 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 AC090617.3-201ENST00000573670 475 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 MIR4680-201ENST00000580906 66 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DOBP13765 RPL30P11-203ENST00000598995 310 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 AC016727.2-201ENST00000603988 621 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 AL670379.2-201ENST00000604983 252 ntBASIC2.29□□□□□ -2.04
HLA-DOBP13765 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DOBP13765 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
HLA-DOBP13765 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DOBP13765 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DOBP13765 MTND5P16-201ENST00000460269 1703 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DOBP13765 AC062016.1-201ENST00000355719 319 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms