Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC233266.1-201ENST00000454518 96 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AC024589.1-201ENST00000512207 263 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AC104136.1-201ENST00000512969 394 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 SNORD60.2-201ENST00000516883 86 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AC242852.1-201ENST00000612151 96 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AC130324.3-201ENST00000614165 542 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 FTX_2.1-201ENST00000618816 94 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AL163051.2-201ENST00000618976 735 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AC244015.1-201ENST00000622301 99 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 MIR1248-201ENST00000629190 106 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 MIR1295B-201ENST00000636144 60 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 RNA5SP300-201ENST00000391197 107 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 RNU2-3P-201ENST00000410144 191 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AL035398.1-201ENST00000430869 322 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AC113410.1-201ENST00000505029 247 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AL356057.1-201ENST00000533798 831 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AL671309.1-201ENST00000603750 544 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AC084824.4-201ENST00000620106 731 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AL603839.4-201ENST00000624658 1005 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AC008993.2-201ENST00000631744 806 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 MTND4P21-201ENST00000453886 1357 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 RNU6-438P-201ENST00000365561 103 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 MIR644A-201ENST00000385262 94 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC010385.1-201ENST00000412374 256 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL6A3P12111 ELOCP14-201ENST00000428070 331 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC007919.1-201ENST00000429380 217 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AL512637.2-201ENST00000431287 1256 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 ELOCP7-201ENST00000439968 331 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC012308.1-201ENST00000451232 178 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC104073.1-201ENST00000451988 151 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 RNU6-840P-201ENST00000517275 65 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
COL6A3P12111 AC069113.3-201ENST00000521019 150 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL6A3P12111 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.17□□□□□ -2.44
COL6A3P12111 MIR8076-201ENST00000611401 83 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC017104.5-201ENST00000637647 639 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 MIR335-201ENST00000362173 94 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 SNORD115-2-201ENST00000362842 82 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 SNORA42.1-201ENST00000363515 137 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
COL6A3P12111 AC068533.2-201ENST00000411872 306 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.17□□□□□ -2.44
COL6A3P12111 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL6A3P12111 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.17□□□□□ -2.44
COL6A3P12111 MTCYBP43-201ENST00000513621 740 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AL442163.3-201ENST00000554110 156 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL6A3P12111 AC092325.1-201ENST00000566449 554 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC131055.1-201ENST00000584626 316 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AC092447.9-201ENST00000603395 144 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 AL031667.3-201ENST00000620124 655 ntBASIC-0.17□□□□□ -2.44
COL6A3P12111 RNU6-778P-201ENST00000363269 103 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 SNORD105-201ENST00000386910 85 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 RNU4-27P-201ENST00000410889 139 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AL158050.1-201ENST00000416077 457 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AL139396.1-201ENST00000421137 167 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 SKA2P1-201ENST00000425592 390 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 SEPT7P5-201ENST00000434048 306 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 SEPT7P4-201ENST00000437076 306 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL6A3P12111 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
COL6A3P12111 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL6A3P12111 U6.107-201ENST00000637108 79 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
COL6A3P12111 SNORA1.1-201ENST00000364671 133 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 MIR548B-201ENST00000385247 97 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.18□□□□□ -2.44
COL6A3P12111 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 ELOCP24-201ENST00000456370 334 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL6A3P12111 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL6A3P12111 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL6A3P12111 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.18□□□□□ -2.44
COL6A3P12111 MIR4782-201ENST00000577987 79 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AP001429.1-201ENST00000602568 530 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AC098483.2-201ENST00000603158 454 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AC004853.1-201ENST00000604902 698 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AC242628.1-201ENST00000606810 391 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 MTND1P37-201ENST00000636562 264 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AC119674.1-220ENST00000641502 1048 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 RNU6-386P-201ENST00000362650 107 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 SNORA80D-201ENST00000384488 135 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 RNU6-878P-201ENST00000384578 110 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 MIR520A-201ENST00000384862 85 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 SNORA75.2-201ENST00000391138 150 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 SNORA75.3-201ENST00000391231 150 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 SNORA75.6-201ENST00000391318 127 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AL353621.1-201ENST00000418219 243 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms