Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU6-1251P-201ENST00000364502 107 ntBASIC-1.47□□□□□ -2.64
TOP2AP11388 RNU6-1280P-201ENST00000365211 107 ntBASIC-1.47□□□□□ -2.64
TOP2AP11388 MIR760-201ENST00000390220 80 ntBASIC-1.47□□□□□ -2.64
TOP2AP11388 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-1.47□□□□□ -2.64
TOP2AP11388 USP9YP14-201ENST00000430663 563 ntBASIC-1.47□□□□□ -2.64
TOP2AP11388 AC245047.8-201ENST00000456455 284 ntBASIC-1.47□□□□□ -2.64
TOP2AP11388 AC113420.1-201ENST00000507903 571 ntBASIC-1.47□□□□□ -2.64
TOP2AP11388 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-1.47□□□□□ -2.64
TOP2AP11388 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.47□□□□□ -2.64
TOP2AP11388 AC040926.1-201ENST00000530195 238 ntBASIC-1.47□□□□□ -2.64
TOP2AP11388 AC013828.2-201ENST00000532487 235 ntBASIC-1.47□□□□□ -2.64
TOP2AP11388 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-1.47□□□□□ -2.64
TOP2AP11388 AL391001.1-201ENST00000602747 715 ntBASIC-1.47□□□□□ -2.64
TOP2AP11388 LINC02555-201ENST00000563933 1951 ntBASIC-1.48□□□□□ -2.65
TOP2AP11388 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-1.48□□□□□ -2.65
TOP2AP11388 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.48□□□□□ -2.65
TOP2AP11388 RPL32P14-201ENST00000463196 378 ntBASIC-1.48□□□□□ -2.65
TOP2AP11388 AC010424.1-201ENST00000506336 297 ntBASIC-1.48□□□□□ -2.65
TOP2AP11388 MTCYBP43-201ENST00000513621 740 ntBASIC-1.48□□□□□ -2.65
TOP2AP11388 AC023442.1-201ENST00000531247 422 ntBASIC-1.48□□□□□ -2.65
TOP2AP11388 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-1.48□□□□□ -2.65
TOP2AP11388 AL353997.4-201ENST00000586196 166 ntBASIC-1.48□□□□□ -2.65
TOP2AP11388 AC004223.2-201ENST00000590309 544 ntBASIC-1.48□□□□□ -2.65
TOP2AP11388 MTND3P19-201ENST00000603825 345 ntBASIC-1.48□□□□□ -2.65
TOP2AP11388 AC242628.1-201ENST00000606810 391 ntBASIC-1.48□□□□□ -2.65
TOP2AP11388 AC091304.9-201ENST00000612091 226 ntBASIC-1.48□□□□□ -2.65
TOP2AP11388 AL355073.2-201ENST00000612106 557 ntBASIC-1.48□□□□□ -2.65
TOP2AP11388 AL109755.1-201ENST00000401791 649 ntBASIC-1.49□□□□□ -2.65
TOP2AP11388 RNU4-27P-201ENST00000410889 139 ntBASIC-1.49□□□□□ -2.65
TOP2AP11388 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-1.49□□□□□ -2.65
TOP2AP11388 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-1.49□□□□□ -2.65
TOP2AP11388 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-1.49□□□□□ -2.65
TOP2AP11388 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.49□□□□□ -2.65
TOP2AP11388 RNU6-94P-201ENST00000607728 107 ntBASIC-1.49□□□□□ -2.65
TOP2AP11388 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-1.49□□□□□ -2.65
TOP2AP11388 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-1.49□□□□□ -2.65
TOP2AP11388 AC009268.2-201ENST00000621925 457 ntBASIC-1.49□□□□□ -2.65
TOP2AP11388 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 MIR563-201ENST00000385080 79 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 RAP1BP3-201ENST00000407180 549 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-1.5□□□□□ -2.65
TOP2AP11388 SKA2P1-201ENST00000425592 390 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-1.5□□□□□ -2.65
TOP2AP11388 AC007919.1-201ENST00000429380 217 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 RNU6-897P-201ENST00000517135 105 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 RNU2-60P-201ENST00000517290 128 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 AC105029.1-201ENST00000520250 669 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 AC138869.1-201ENST00000568623 124 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 MIR548AO-201ENST00000579992 96 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 AC131159.1-201ENST00000621854 213 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 AC098679.4-201ENST00000624241 654 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 RNU6-1274P-201ENST00000384557 107 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 SNORD111-201ENST00000408139 94 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 RNU2-43P-201ENST00000410306 190 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 RNU6-994P-201ENST00000410507 111 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 AL512637.2-201ENST00000431287 1256 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 AC092427.1-201ENST00000439177 601 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 AC005042.3-201ENST00000453230 174 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 AL163973.1-201ENST00000484753 577 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 AL160314.1-201ENST00000490836 438 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 SEPT14P17-201ENST00000617978 177 ntBASIC-1.5□□□□□ -2.65
TOP2AP11388 ENSAP3-201ENST00000312710 333 ntBASIC-1.51□□□□□ -2.65
TOP2AP11388 Y_RNA.100-201ENST00000363141 102 ntBASIC-1.51□□□□□ -2.65
TOP2AP11388 RNU4-16P-201ENST00000364737 141 ntBASIC-1.51□□□□□ -2.65
TOP2AP11388 RNU6-1207P-201ENST00000384343 107 ntBASIC-1.51□□□□□ -2.65
TOP2AP11388 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.51□□□□□ -2.65
TOP2AP11388 AC008267.5-201ENST00000424928 265 ntBASIC-1.51□□□□□ -2.65
TOP2AP11388 MTCO3P29-201ENST00000432119 779 ntBASIC-1.51□□□□□ -2.65
TOP2AP11388 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.51□□□□□ -2.65
TOP2AP11388 AC090572.1-201ENST00000519251 160 ntBASIC-1.51□□□□□ -2.65
TOP2AP11388 MIR3115-201ENST00000577915 68 ntBASIC-1.51□□□□□ -2.65
TOP2AP11388 AL590491.3-201ENST00000610731 82 ntBASIC-1.51□□□□□ -2.65
TOP2AP11388 MTND1P37-201ENST00000636562 264 ntBASIC-1.51□□□□□ -2.65
TOP2AP11388 MIR365A-201ENST00000362260 87 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 RNU6-778P-201ENST00000363269 103 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 SNORD114-3-201ENST00000364969 75 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 SNORA4.2-201ENST00000365313 147 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 AL603865.2-201ENST00000401679 213 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 MTCYBP38-201ENST00000417160 1123 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 RN7SKP19-201ENST00000516016 252 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 RNU1-86P-201ENST00000516108 154 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 RNU6-27P-201ENST00000516146 107 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 RNU1-107P-201ENST00000516617 154 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-1.52□□□□□ -2.65
TOP2AP11388 RBM11P1-201ENST00000604951 799 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 AC107075.1-201ENST00000613695 314 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-1.52□□□□□ -2.65
TOP2AP11388 MIR1248-201ENST00000629190 106 ntBASIC-1.52□□□□□ -2.65
TOP2AP11388 MRPS10P2-201ENST00000431226 381 ntBASIC-1.53□□□□□ -2.65
TOP2AP11388 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-1.53□□□□□ -2.65
TOP2AP11388 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.53□□□□□ -2.65
TOP2AP11388 RNU6-333P-201ENST00000459117 107 ntBASIC-1.53□□□□□ -2.65
TOP2AP11388 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-1.53□□□□□ -2.65
TOP2AP11388 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-1.53□□□□□ -2.65
TOP2AP11388 AC093249.1-201ENST00000567049 203 ntBASIC-1.53□□□□□ -2.65
TOP2AP11388 AL358072.1-201ENST00000604156 575 ntBASIC-1.53□□□□□ -2.65
TOP2AP11388 AL357080.1-201ENST00000617394 239 ntBASIC-1.53□□□□□ -2.65
TOP2AP11388 AC093875.1-201ENST00000623688 504 ntBASIC-1.53□□□□□ -2.65
TOP2AP11388 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms