Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU1-98P-201ENST00000458992 160 ntBASIC1.14□□□□□ -2.23
CD28P10747 RPS29P27-201ENST00000463711 170 ntBASIC1.14□□□□□ -2.23
CD28P10747 TOMM22P6-201ENST00000465035 409 ntBASIC1.14□□□□□ -2.23
CD28P10747 SNORA14.1-201ENST00000516113 141 ntBASIC1.14□□□□□ -2.23
CD28P10747 RNU6-970P-201ENST00000516312 107 ntBASIC1.14□□□□□ -2.23
CD28P10747 SNORA40.12-201ENST00000516329 111 ntBASIC1.14□□□□□ -2.23
CD28P10747 SNORA31.17-201ENST00000516953 127 ntBASIC1.14□□□□□ -2.23
CD28P10747 AC109446.1-201ENST00000566172 220 ntBASIC1.14□□□□□ -2.23
CD28P10747 RNU6-85P-201ENST00000605989 107 ntBASIC1.14□□□□□ -2.23
CD28P10747 AC064807.4-201ENST00000607201 407 ntBASIC1.14□□□□□ -2.23
CD28P10747 AC017083.3-201ENST00000609955 700 ntBASIC1.14□□□□□ -2.23
CD28P10747 Z69908.1-201ENST00000622603 247 ntBASIC1.14□□□□□ -2.23
CD28P10747 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.14□□□□□ -2.23
CD28P10747 Y_RNA.77-201ENST00000362962 107 ntBASIC1.13□□□□□ -2.23
CD28P10747 RNU6-112P-201ENST00000363599 104 ntBASIC1.13□□□□□ -2.23
CD28P10747 RNU6-82P-201ENST00000363970 107 ntBASIC1.13□□□□□ -2.23
CD28P10747 Y_RNA.255-201ENST00000364581 97 ntBASIC1.13□□□□□ -2.23
CD28P10747 SNORA25.9-201ENST00000365087 128 ntBASIC1.13□□□□□ -2.23
CD28P10747 RNU6-296P-201ENST00000384608 107 ntBASIC1.13□□□□□ -2.23
CD28P10747 MTCO3P41-201ENST00000414801 328 ntBASIC1.13□□□□□ -2.23
CD28P10747 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.13□□□□□ -2.23
CD28P10747 RNU6-956P-201ENST00000458868 103 ntBASIC1.13□□□□□ -2.23
CD28P10747 RNA5SP57-201ENST00000459463 123 ntBASIC1.13□□□□□ -2.23
CD28P10747 AC087477.1-201ENST00000465747 340 ntBASIC1.13□□□□□ -2.23
CD28P10747 MTCO3P38-201ENST00000468910 766 ntBASIC1.13□□□□□ -2.23
CD28P10747 SNRPGP7-201ENST00000469016 106 ntBASIC1.13□□□□□ -2.23
CD28P10747 Y_RNA.675-201ENST00000516389 149 ntBASIC1.13□□□□□ -2.23
CD28P10747 MTND4P7-201ENST00000523876 130 ntBASIC1.13□□□□□ -2.23
CD28P10747 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.13□□□□□ -2.23
CD28P10747 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.13□□□□□ -2.23
CD28P10747 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.13□□□□□ -2.23
CD28P10747 AC016925.2-201ENST00000605108 242 ntBASIC1.13□□□□□ -2.23
CD28P10747 AP001330.5-201ENST00000607176 411 ntBASIC1.13□□□□□ -2.23
CD28P10747 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CD28P10747 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.13□□□□□ -2.23
CD28P10747 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.13□□□□□ -2.23
CD28P10747 AC103705.1-201ENST00000619013 241 ntBASIC1.13□□□□□ -2.23
CD28P10747 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.13□□□□□ -2.23
CD28P10747 AC233981.2-201ENST00000611524 1614 ntBASIC1.13□□□□□ -2.23
CD28P10747 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CD28P10747 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CD28P10747 MIR424-201ENST00000362227 98 ntBASIC1.12□□□□□ -2.23
CD28P10747 SNORA36A-201ENST00000384221 132 ntBASIC1.12□□□□□ -2.23
CD28P10747 MTCO1P21-201ENST00000416634 589 ntBASIC1.12□□□□□ -2.23
CD28P10747 NCOR1P3-201ENST00000420479 303 ntBASIC1.12□□□□□ -2.23
CD28P10747 AC090960.1-201ENST00000421072 306 ntBASIC1.12□□□□□ -2.23
CD28P10747 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.12□□□□□ -2.23
CD28P10747 SNRPGP13-201ENST00000442212 177 ntBASIC1.12□□□□□ -2.23
CD28P10747 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.12□□□□□ -2.23
CD28P10747 RPL31P3-201ENST00000458430 332 ntBASIC1.12□□□□□ -2.23
CD28P10747 AC021146.2-201ENST00000504736 556 ntBASIC1.12□□□□□ -2.23
CD28P10747 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.12□□□□□ -2.23
CD28P10747 AC010493.1-201ENST00000513479 292 ntBASIC1.12□□□□□ -2.23
CD28P10747 RNU6-1098P-201ENST00000516772 96 ntBASIC1.12□□□□□ -2.23
CD28P10747 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.12□□□□□ -2.23
CD28P10747 AP003034.1-201ENST00000534621 422 ntBASIC1.12□□□□□ -2.23
CD28P10747 Z99497.2-201ENST00000603634 310 ntBASIC1.12□□□□□ -2.23
CD28P10747 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.12□□□□□ -2.23
CD28P10747 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.12□□□□□ -2.23
CD28P10747 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.12□□□□□ -2.23
CD28P10747 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CD28P10747 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CD28P10747 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
CD28P10747 Y_RNA.504-201ENST00000384481 104 ntBASIC1.11□□□□□ -2.23
CD28P10747 Y_RNA.553-201ENST00000384670 102 ntBASIC1.11□□□□□ -2.23
CD28P10747 Y_RNA.582-201ENST00000391023 95 ntBASIC1.11□□□□□ -2.23
CD28P10747 RPS26P42-201ENST00000413485 326 ntBASIC1.11□□□□□ -2.23
CD28P10747 CDK8P2-201ENST00000415020 547 ntBASIC1.11□□□□□ -2.23
CD28P10747 AC012306.1-201ENST00000423267 114 ntBASIC1.11□□□□□ -2.23
CD28P10747 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.11□□□□□ -2.23
CD28P10747 AC139712.2-201ENST00000424302 339 ntBASIC1.11□□□□□ -2.23
CD28P10747 C8orf59P1-201ENST00000429930 303 ntBASIC1.11□□□□□ -2.23
CD28P10747 UBE2V1P8-201ENST00000437166 265 ntBASIC1.11□□□□□ -2.23
CD28P10747 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.11□□□□□ -2.23
CD28P10747 SNRPEP8-201ENST00000442866 260 ntBASIC1.11□□□□□ -2.23
CD28P10747 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.11□□□□□ -2.23
CD28P10747 MTCO1P19-201ENST00000443487 500 ntBASIC1.11□□□□□ -2.23
CD28P10747 AC010531.2-201ENST00000465012 153 ntBASIC1.11□□□□□ -2.23
CD28P10747 RN7SKP298-201ENST00000515950 94 ntBASIC1.11□□□□□ -2.23
CD28P10747 RNU6-1069P-201ENST00000516612 133 ntBASIC1.11□□□□□ -2.23
CD28P10747 SNORD60.2-201ENST00000516883 86 ntBASIC1.11□□□□□ -2.23
CD28P10747 AP005597.4-201ENST00000526762 229 ntBASIC1.11□□□□□ -2.23
CD28P10747 AL158211.1-201ENST00000566763 763 ntBASIC1.11□□□□□ -2.23
CD28P10747 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.11□□□□□ -2.23
CD28P10747 AC004223.2-201ENST00000590309 544 ntBASIC1.11□□□□□ -2.23
CD28P10747 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.11□□□□□ -2.23
CD28P10747 AC073648.5-201ENST00000603502 305 ntBASIC1.11□□□□□ -2.23
CD28P10747 CTHRC1P1-201ENST00000605383 469 ntBASIC1.11□□□□□ -2.23
CD28P10747 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.11□□□□□ -2.23
CD28P10747 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.11□□□□□ -2.23
CD28P10747 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.11□□□□□ -2.23
CD28P10747 AC068205.3-201ENST00000636385 468 ntBASIC1.11□□□□□ -2.23
CD28P10747 MIR3974-201ENST00000637126 96 ntBASIC1.11□□□□□ -2.23
CD28P10747 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.11□□□□□ -2.23
CD28P10747 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CD28P10747 Y_RNA.1-201ENST00000352915 104 ntBASIC1.1□□□□□ -2.23
CD28P10747 RNU6-439P-201ENST00000384188 106 ntBASIC1.1□□□□□ -2.23
CD28P10747 MIR499A-201ENST00000384903 122 ntBASIC1.1□□□□□ -2.23
CD28P10747 RNU6-955P-201ENST00000410497 104 ntBASIC1.1□□□□□ -2.23
CD28P10747 AL357134.1-201ENST00000445848 426 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms