Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.99□□□□□ -1.77
RARAP10276 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.99□□□□□ -1.77
RARAP10276 AL137843.1-201ENST00000605078 385 ntBASIC3.99□□□□□ -1.77
RARAP10276 RNU6-91P-201ENST00000607774 107 ntBASIC3.99□□□□□ -1.77
RARAP10276 AC069200.1-201ENST00000609511 323 ntBASIC3.99□□□□□ -1.77
RARAP10276 AL391903.3-201ENST00000612158 163 ntBASIC3.99□□□□□ -1.77
RARAP10276 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RARAP10276 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RARAP10276 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.99□□□□□ -1.77
RARAP10276 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.98□□□□□ -1.77
RARAP10276 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RARAP10276 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.98□□□□□ -1.77
RARAP10276 MAPK10-373ENST00000641983 6772 ntBASIC3.98□□□□□ -1.77
RARAP10276 U3.9-201ENST00000363823 204 ntBASIC3.98□□□□□ -1.77
RARAP10276 RNA5SP97-201ENST00000365006 84 ntBASIC3.98□□□□□ -1.77
RARAP10276 Y_RNA.310-201ENST00000365063 113 ntBASIC3.98□□□□□ -1.77
RARAP10276 Y_RNA.341-201ENST00000365341 102 ntBASIC3.98□□□□□ -1.77
RARAP10276 RNU6-969P-201ENST00000383900 105 ntBASIC3.98□□□□□ -1.77
RARAP10276 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RARAP10276 RNU6-855P-201ENST00000410395 104 ntBASIC3.98□□□□□ -1.77
RARAP10276 RN7SKP177-201ENST00000410567 355 ntBASIC3.98□□□□□ -1.77
RARAP10276 AC006461.1-201ENST00000412637 326 ntBASIC3.98□□□□□ -1.77
RARAP10276 RPL23AP82-202ENST00000427528 469 ntBASIC3.98□□□□□ -1.77
RARAP10276 HMGN2P20-201ENST00000437531 273 ntBASIC3.98□□□□□ -1.77
RARAP10276 SNORA71B-202ENST00000439232 272 ntBASIC3.98□□□□□ -1.77
RARAP10276 RNU7-197P-201ENST00000458836 62 ntBASIC3.98□□□□□ -1.77
RARAP10276 SNORA84-201ENST00000459229 133 ntBASIC3.98□□□□□ -1.77
RARAP10276 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.98□□□□□ -1.77
RARAP10276 RN7SKP83-201ENST00000516512 178 ntBASIC3.98□□□□□ -1.77
RARAP10276 RNU6-1231P-201ENST00000517185 103 ntBASIC3.98□□□□□ -1.77
RARAP10276 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.98□□□□□ -1.77
RARAP10276 MIR5006-201ENST00000583027 110 ntBASIC3.98□□□□□ -1.77
RARAP10276 AL606490.9-201ENST00000603331 271 ntBASIC3.98□□□□□ -1.77
RARAP10276 HSPE1P7-201ENST00000604681 321 ntBASIC3.98□□□□□ -1.77
RARAP10276 AL137849.1-201ENST00000604767 169 ntBASIC3.98□□□□□ -1.77
RARAP10276 AL391261.4-201ENST00000616012 481 ntBASIC3.98□□□□□ -1.77
RARAP10276 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.98□□□□□ -1.77
RARAP10276 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RARAP10276 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.98□□□□□ -1.77
RARAP10276 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RARAP10276 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RARAP10276 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RARAP10276 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.98□□□□□ -1.77
RARAP10276 AL672296.1-201ENST00000427780 2158 ntBASIC3.97□□□□□ -1.77
RARAP10276 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RARAP10276 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
RARAP10276 RNU6-1325P-201ENST00000364905 105 ntBASIC3.97□□□□□ -1.77
RARAP10276 Y_RNA.361-201ENST00000365515 120 ntBASIC3.97□□□□□ -1.77
RARAP10276 SNORA18.2-201ENST00000383865 132 ntBASIC3.97□□□□□ -1.77
RARAP10276 Y_RNA.456-201ENST00000384232 111 ntBASIC3.97□□□□□ -1.77
RARAP10276 SNORA57.1-201ENST00000391227 145 ntBASIC3.97□□□□□ -1.77
RARAP10276 AC002075.2-201ENST00000425207 252 ntBASIC3.97□□□□□ -1.77
RARAP10276 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.97□□□□□ -1.77
RARAP10276 AC245047.8-201ENST00000456455 284 ntBASIC3.97□□□□□ -1.77
RARAP10276 snoU13.28-201ENST00000459235 104 ntBASIC3.97□□□□□ -1.77
RARAP10276 AC091179.1-201ENST00000461606 579 ntBASIC3.97□□□□□ -1.77
RARAP10276 Y_RNA.686-201ENST00000516548 134 ntBASIC3.97□□□□□ -1.77
RARAP10276 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.97□□□□□ -1.77
RARAP10276 AC006133.1-201ENST00000617106 264 ntBASIC3.97□□□□□ -1.77
RARAP10276 ZYXP1-201ENST00000617638 118 ntBASIC3.97□□□□□ -1.77
RARAP10276 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RARAP10276 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.97□□□□□ -1.77
RARAP10276 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RARAP10276 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RARAP10276 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.96□□□□□ -1.78
RARAP10276 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.96□□□□□ -1.78
RARAP10276 RNU6-153P-201ENST00000364422 104 ntBASIC3.96□□□□□ -1.78
RARAP10276 Y_RNA.333-201ENST00000365274 102 ntBASIC3.96□□□□□ -1.78
RARAP10276 RNU6-80P-201ENST00000384195 107 ntBASIC3.96□□□□□ -1.78
RARAP10276 U8.12-201ENST00000384701 133 ntBASIC3.96□□□□□ -1.78
RARAP10276 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.96□□□□□ -1.78
RARAP10276 AL121914.1-201ENST00000450188 156 ntBASIC3.96□□□□□ -1.78
RARAP10276 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.96□□□□□ -1.78
RARAP10276 RNU7-141P-201ENST00000459304 62 ntBASIC3.96□□□□□ -1.78
RARAP10276 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.96□□□□□ -1.78
RARAP10276 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.96□□□□□ -1.78
RARAP10276 RN7SKP209-201ENST00000516888 304 ntBASIC3.96□□□□□ -1.78
RARAP10276 AC022695.1-201ENST00000522089 237 ntBASIC3.96□□□□□ -1.78
RARAP10276 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.96□□□□□ -1.78
RARAP10276 LARP7P3-201ENST00000579888 337 ntBASIC3.96□□□□□ -1.78
RARAP10276 TUG1_4.1-201ENST00000619464 181 ntBASIC3.96□□□□□ -1.78
RARAP10276 AC034229.5-201ENST00000624258 185 ntBASIC3.96□□□□□ -1.78
RARAP10276 U6.115-201ENST00000636045 103 ntBASIC3.96□□□□□ -1.78
RARAP10276 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RARAP10276 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RARAP10276 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RARAP10276 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RARAP10276 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RARAP10276 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.95□□□□□ -1.78
RARAP10276 RNU6-1205P-201ENST00000363625 106 ntBASIC3.95□□□□□ -1.78
RARAP10276 RNU6-643P-201ENST00000384018 107 ntBASIC3.95□□□□□ -1.78
RARAP10276 SNORA67.2-201ENST00000384300 149 ntBASIC3.95□□□□□ -1.78
RARAP10276 MIR134-201ENST00000385258 73 ntBASIC3.95□□□□□ -1.78
RARAP10276 AC004975.1-201ENST00000428733 208 ntBASIC3.95□□□□□ -1.78
RARAP10276 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.95□□□□□ -1.78
RARAP10276 AC145146.1-201ENST00000496370 254 ntBASIC3.95□□□□□ -1.78
RARAP10276 RN7SKP21-201ENST00000516503 220 ntBASIC3.95□□□□□ -1.78
RARAP10276 SCARNA14-201ENST00000516903 136 ntBASIC3.95□□□□□ -1.78
RARAP10276 AC007224.1-201ENST00000564410 144 ntBASIC3.95□□□□□ -1.78
RARAP10276 MIR5688-201ENST00000580619 83 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms