Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU6-1114P-201ENST00000516022 107 ntBASIC2.97□□□□□ -1.93
RHOP08100 RNU6-397P-201ENST00000516226 104 ntBASIC2.97□□□□□ -1.93
RHOP08100 RNU5B-3P-201ENST00000516601 115 ntBASIC2.97□□□□□ -1.93
RHOP08100 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.97□□□□□ -1.93
RHOP08100 AC023157.2-201ENST00000540596 141 ntBASIC2.97□□□□□ -1.93
RHOP08100 AC021231.3-201ENST00000558497 370 ntBASIC2.97□□□□□ -1.93
RHOP08100 RNU6-91P-201ENST00000607774 107 ntBASIC2.97□□□□□ -1.93
RHOP08100 U6.104-201ENST00000637979 90 ntBASIC2.97□□□□□ -1.93
RHOP08100 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RHOP08100 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RHOP08100 AP003122.5-201ENST00000527668 3766 ntBASIC2.97□□□□□ -1.93
RHOP08100 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
RHOP08100 RNU6-222P-201ENST00000362438 107 ntBASIC2.96□□□□□ -1.94
RHOP08100 Y_RNA.26-201ENST00000362539 101 ntBASIC2.96□□□□□ -1.94
RHOP08100 RNU6-1301P-201ENST00000362724 104 ntBASIC2.96□□□□□ -1.94
RHOP08100 RNU1-105P-201ENST00000363470 161 ntBASIC2.96□□□□□ -1.94
RHOP08100 SNORD115-8-201ENST00000363856 82 ntBASIC2.96□□□□□ -1.94
RHOP08100 Y_RNA.222-201ENST00000364264 102 ntBASIC2.96□□□□□ -1.94
RHOP08100 Y_RNA.307-201ENST00000365022 117 ntBASIC2.96□□□□□ -1.94
RHOP08100 SNORD115-38-201ENST00000365037 82 ntBASIC2.96□□□□□ -1.94
RHOP08100 RNU6-1318P-201ENST00000365389 103 ntBASIC2.96□□□□□ -1.94
RHOP08100 Y_RNA.476-201ENST00000384347 108 ntBASIC2.96□□□□□ -1.94
RHOP08100 Y_RNA.504-201ENST00000384481 104 ntBASIC2.96□□□□□ -1.94
RHOP08100 MIR196B-201ENST00000384852 84 ntBASIC2.96□□□□□ -1.94
RHOP08100 MIR32-201ENST00000384965 70 ntBASIC2.96□□□□□ -1.94
RHOP08100 RNU6-847P-201ENST00000411115 108 ntBASIC2.96□□□□□ -1.94
RHOP08100 EIF1P2-201ENST00000428233 350 ntBASIC2.96□□□□□ -1.94
RHOP08100 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.96□□□□□ -1.94
RHOP08100 AC244670.1-201ENST00000436879 112 ntBASIC2.96□□□□□ -1.94
RHOP08100 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.96□□□□□ -1.94
RHOP08100 GPM6BP3-201ENST00000442797 145 ntBASIC2.96□□□□□ -1.94
RHOP08100 AC012308.1-201ENST00000451232 178 ntBASIC2.96□□□□□ -1.94
RHOP08100 LINC01399-202ENST00000458450 244 ntBASIC2.96□□□□□ -1.94
RHOP08100 RPS29P12-201ENST00000460178 152 ntBASIC2.96□□□□□ -1.94
RHOP08100 AC091179.1-201ENST00000461606 579 ntBASIC2.96□□□□□ -1.94
RHOP08100 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.96□□□□□ -1.94
RHOP08100 AC027288.2-201ENST00000553028 243 ntBASIC2.96□□□□□ -1.94
RHOP08100 AC007375.1-201ENST00000554513 578 ntBASIC2.96□□□□□ -1.94
RHOP08100 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.96□□□□□ -1.94
RHOP08100 MIR3668-201ENST00000582138 75 ntBASIC2.96□□□□□ -1.94
RHOP08100 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.96□□□□□ -1.94
RHOP08100 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.96□□□□□ -1.94
RHOP08100 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.96□□□□□ -1.94
RHOP08100 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RHOP08100 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.96□□□□□ -1.94
RHOP08100 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
RHOP08100 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RHOP08100 MIR148B-201ENST00000362252 99 ntBASIC2.95□□□□□ -1.94
RHOP08100 Y_RNA.64-201ENST00000362845 102 ntBASIC2.95□□□□□ -1.94
RHOP08100 RNA5SP383-201ENST00000362934 120 ntBASIC2.95□□□□□ -1.94
RHOP08100 RNU6-806P-201ENST00000365147 105 ntBASIC2.95□□□□□ -1.94
RHOP08100 Y_RNA.376-201ENST00000365638 108 ntBASIC2.95□□□□□ -1.94
RHOP08100 DYNLT3P1-201ENST00000378574 347 ntBASIC2.95□□□□□ -1.94
RHOP08100 MT-TW-201ENST00000387382 68 ntBASIC2.95□□□□□ -1.94
RHOP08100 RNU6-907P-201ENST00000390924 102 ntBASIC2.95□□□□□ -1.94
RHOP08100 SNORD78.2-201ENST00000391076 69 ntBASIC2.95□□□□□ -1.94
RHOP08100 MIR1302-6-201ENST00000408466 90 ntBASIC2.95□□□□□ -1.94
RHOP08100 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.95□□□□□ -1.94
RHOP08100 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.95□□□□□ -1.94
RHOP08100 RPL39P29-201ENST00000447779 157 ntBASIC2.95□□□□□ -1.94
RHOP08100 AC107626.1-201ENST00000471084 183 ntBASIC2.95□□□□□ -1.94
RHOP08100 AP000870.1-201ENST00000472927 406 ntBASIC2.95□□□□□ -1.94
RHOP08100 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.95□□□□□ -1.94
RHOP08100 RNU6-1012P-201ENST00000516606 109 ntBASIC2.95□□□□□ -1.94
RHOP08100 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.95□□□□□ -1.94
RHOP08100 AP003733.2-201ENST00000529409 171 ntBASIC2.95□□□□□ -1.94
RHOP08100 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.95□□□□□ -1.94
RHOP08100 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.95□□□□□ -1.94
RHOP08100 MIR3124-201ENST00000582636 67 ntBASIC2.95□□□□□ -1.94
RHOP08100 AC013412.1-201ENST00000610687 192 ntBASIC2.95□□□□□ -1.94
RHOP08100 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.95□□□□□ -1.94
RHOP08100 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
RHOP08100 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RHOP08100 AC092435.3-201ENST00000565538 3654 ntBASIC2.95□□□□□ -1.94
RHOP08100 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.95□□□□□ -1.94
RHOP08100 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.95□□□□□ -1.94
RHOP08100 AC099654.7-201ENST00000635788 2127 ntBASIC2.95□□□□□ -1.94
RHOP08100 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.94□□□□□ -1.94
RHOP08100 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.94□□□□□ -1.94
RHOP08100 Y_RNA.105-201ENST00000363182 111 ntBASIC2.94□□□□□ -1.94
RHOP08100 Y_RNA.483-201ENST00000384380 101 ntBASIC2.94□□□□□ -1.94
RHOP08100 RNU6-19P-201ENST00000384718 107 ntBASIC2.94□□□□□ -1.94
RHOP08100 RNU6-750P-201ENST00000390946 107 ntBASIC2.94□□□□□ -1.94
RHOP08100 RNA5SP354-201ENST00000391247 136 ntBASIC2.94□□□□□ -1.94
RHOP08100 AL138827.1-201ENST00000402666 306 ntBASIC2.94□□□□□ -1.94
RHOP08100 RNU6-121P-201ENST00000410525 99 ntBASIC2.94□□□□□ -1.94
RHOP08100 RNU2-49P-201ENST00000410666 184 ntBASIC2.94□□□□□ -1.94
RHOP08100 ARL5AP4-201ENST00000430731 512 ntBASIC2.94□□□□□ -1.94
RHOP08100 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.94□□□□□ -1.94
RHOP08100 AC115990.1-201ENST00000526957 301 ntBASIC2.94□□□□□ -1.94
RHOP08100 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.94□□□□□ -1.94
RHOP08100 AC078899.3-201ENST00000599065 212 ntBASIC2.94□□□□□ -1.94
RHOP08100 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RHOP08100 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.94□□□□□ -1.94
RHOP08100 AC010889.1-201ENST00000566193 2666 ntBASIC2.93□□□□□ -1.94
RHOP08100 RNU1-112P-201ENST00000364401 164 ntBASIC2.93□□□□□ -1.94
RHOP08100 Y_RNA.319-201ENST00000365138 92 ntBASIC2.93□□□□□ -1.94
RHOP08100 Y_RNA.439-201ENST00000384119 94 ntBASIC2.93□□□□□ -1.94
RHOP08100 Y_RNA.562-201ENST00000384695 113 ntBASIC2.93□□□□□ -1.94
RHOP08100 MIR9-1-201ENST00000385198 89 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms