Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AL365184.2-201ENST00000431139 435 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AL606662.1-201ENST00000445763 553 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AL133217.1-201ENST00000450980 425 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 RPS23P5-201ENST00000495419 428 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AC016632.1-201ENST00000503994 196 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 SCARNA16.2-201ENST00000516520 172 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 MTND4P33-201ENST00000556706 766 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AC090517.1-201ENST00000569307 266 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 MIR4661-201ENST00000582720 75 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AC009159.2-201ENST00000617603 606 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 AC009878.1-201ENST00000621819 340 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
HLA-DQB2P05538 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
HLA-DQB2P05538 RNU6-501P-201ENST00000364072 100 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 RNU6-715P-201ENST00000365204 103 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 RNU6-418P-201ENST00000384035 107 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 MIR499A-201ENST00000384903 122 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
HLA-DQB2P05538 RNU6-550P-201ENST00000391057 101 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 AC010099.3-201ENST00000423896 409 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 HSFY7P-201ENST00000432672 318 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 AC002486.1-201ENST00000435098 391 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 USP9YP28-201ENST00000435142 589 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 HSFY8P-201ENST00000437934 318 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.66□□□□□ -2.3
HLA-DQB2P05538 RPS4XP11-201ENST00000446897 772 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 C1DP4-201ENST00000455429 424 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 AC091874.1-201ENST00000511402 339 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 FABP5P5-201ENST00000515537 406 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 Y_RNA.672-201ENST00000516289 104 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 RNU6-567P-201ENST00000516746 107 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 PCMTD1P2-201ENST00000565017 355 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 AL021879.1-201ENST00000611756 288 ntBASIC0.66□□□□□ -2.3
HLA-DQB2P05538 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.66□□□□□ -2.3
HLA-DQB2P05538 MTND5P17-201ENST00000418405 1603 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 RNU6-545P-201ENST00000362681 104 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 SNORA33-201ENST00000363664 130 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 SNORA72.2-201ENST00000365028 127 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 RNU6-169P-201ENST00000365336 107 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 SNORA36A-201ENST00000384221 132 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 RNU6-17P-201ENST00000384245 107 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 RNU6-18P-201ENST00000384527 107 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.65□□□□□ -2.31
HLA-DQB2P05538 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.65□□□□□ -2.31
HLA-DQB2P05538 MTCO2P6-201ENST00000463134 685 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 RPL39P38-201ENST00000467018 153 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 RNU2-34P-201ENST00000516534 121 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 SUMO2P16-201ENST00000519475 264 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 DEFB131C-201ENST00000528817 165 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.65□□□□□ -2.31
HLA-DQB2P05538 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.65□□□□□ -2.31
HLA-DQB2P05538 TMF1P1-201ENST00000576058 373 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.65□□□□□ -2.31
HLA-DQB2P05538 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 AC009509.4-201ENST00000619202 509 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 SNORA43.4-201ENST00000629559 138 ntBASIC0.65□□□□□ -2.31
HLA-DQB2P05538 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HLA-DQB2P05538 SNORA20.2-201ENST00000383922 131 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 Y_RNA.504-201ENST00000384481 104 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 MIR548J-201ENST00000408833 112 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 RNU2-8P-201ENST00000410727 190 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 PIGFP2-201ENST00000421400 651 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.64□□□□□ -2.31
HLA-DQB2P05538 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-DQB2P05538 RAB28P5-201ENST00000427490 651 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-DQB2P05538 MTCYBP1-201ENST00000454315 1119 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 SNRPFP3-201ENST00000457792 225 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.64□□□□□ -2.31
HLA-DQB2P05538 RAP1BP2-201ENST00000478270 544 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 AC008628.2-201ENST00000502605 298 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-DQB2P05538 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-DQB2P05538 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-DQB2P05538 LRRC34P2-201ENST00000514850 553 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 Y_RNA.676-201ENST00000516393 96 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 RNU6-1178P-201ENST00000516674 107 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 SNORA70.22-201ENST00000517160 124 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.64□□□□□ -2.31
HLA-DQB2P05538 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.64□□□□□ -2.31
HLA-DQB2P05538 AC133485.1-201ENST00000567176 124 ntBASIC0.64□□□□□ -2.31
HLA-DQB2P05538 AC138907.6-201ENST00000568401 126 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms