Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MTND3P9-201ENST00000429526 346 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AMD1P1-201ENST00000457220 922 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AC132942.1-201ENST00000486753 483 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AC108210.2-201ENST00000503681 201 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.32□□□□□ -2.2
HLA-DPB1P04440 GNAI2P1-201ENST00000541815 315 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AC021231.3-201ENST00000558497 370 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AC015712.3-201ENST00000559380 164 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AC009994.1-201ENST00000606889 253 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AL357078.3-201ENST00000607528 618 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 U1.36-201ENST00000620684 176 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.32□□□□□ -2.2
HLA-DPB1P04440 AC009541.1-201ENST00000438279 2662 ntBASIC1.32□□□□□ -2.2
HLA-DPB1P04440 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HLA-DPB1P04440 RNU6-82P-201ENST00000363970 107 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 RNU6-1322P-201ENST00000364309 107 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 RNU6-1317P-201ENST00000364582 104 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 RNU4-42P-201ENST00000364738 142 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
HLA-DPB1P04440 MTCO3P40-201ENST00000392516 676 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 AC012306.1-201ENST00000423267 114 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 AL513185.2-201ENST00000425543 193 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.31□□□□□ -2.2
HLA-DPB1P04440 MTND1P29-201ENST00000448112 647 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 MTND3P16-201ENST00000452205 344 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 snoU13.23-201ENST00000458863 104 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 SRRM1P2-201ENST00000464531 1192 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 AC010409.1-201ENST00000487382 476 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 AC025465.4-201ENST00000513422 638 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 SNORD53B-201ENST00000577887 78 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 SNORA59B-202ENST00000578183 701 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 PIGPP4-201ENST00000584447 307 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 AC245008.1-201ENST00000608123 476 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 AC005520.5-201ENST00000613926 164 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 OR5AK4P-201ENST00000635912 903 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.31□□□□□ -2.2
HLA-DPB1P04440 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
HLA-DPB1P04440 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
HLA-DPB1P04440 CBX3P1-201ENST00000325243 554 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 RNU6-1329P-201ENST00000365664 107 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 MIR517C-201ENST00000385103 95 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 MIR514A2-201ENST00000385131 88 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 MIR514A3-201ENST00000385132 88 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.3□□□□□ -2.2
HLA-DPB1P04440 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DPB1P04440 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.3□□□□□ -2.2
HLA-DPB1P04440 RNU7-14P-201ENST00000459331 62 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 RNU6-1037P-201ENST00000459571 107 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 RNU6-1208P-201ENST00000459588 107 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 Y_RNA.654-201ENST00000497848 106 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AC092436.3-201ENST00000511788 257 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 SNORD60.2-201ENST00000516883 86 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AC087854.1-201ENST00000519706 414 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DPB1P04440 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AC015720.1-201ENST00000565251 277 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AC090517.1-201ENST00000569307 266 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AC104984.5-201ENST00000586878 94 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AC010900.2-201ENST00000604508 210 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 FAM157A-202ENST00000615155 405 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AL359880.1-201ENST00000621879 266 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AC124864.2-201ENST00000624736 186 ntBASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.3□□□□□ -2.2
HLA-DPB1P04440 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.3□□□□□ -2.2
HLA-DPB1P04440 AC131280.1-202ENST00000624067 4211 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HLA-DPB1P04440 RNU6-227P-201ENST00000362865 103 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 RNU1-76P-201ENST00000362903 159 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 RNA5SP99-201ENST00000364020 114 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 RNU6-522P-201ENST00000364497 107 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 SNORA18.2-201ENST00000383865 132 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 RNU6-1068P-201ENST00000410958 103 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 MTCO3P46-201ENST00000425787 232 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.29□□□□□ -2.2
HLA-DPB1P04440 HMGB1P18-201ENST00000438801 619 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 RNU1-131P-201ENST00000458943 161 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.29□□□□□ -2.2
HLA-DPB1P04440 SNORA19.2-201ENST00000516013 114 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 RNU5F-4P-201ENST00000516581 114 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 SNORA31.17-201ENST00000516953 127 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 MRPS36P4-201ENST00000534436 298 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.29□□□□□ -2.2
HLA-DPB1P04440 SUB1P4-201ENST00000566062 339 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 AL645939.4-201ENST00000604495 135 ntBASIC1.29□□□□□ -2.2
HLA-DPB1P04440 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.29□□□□□ -2.2
HLA-DPB1P04440 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
HLA-DPB1P04440 RNU5B-2P-201ENST00000363036 113 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 RNU6-1085P-201ENST00000363576 107 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 RNU6-60P-201ENST00000364792 103 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 RNU6-438P-201ENST00000365561 103 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 SNORA29-201ENST00000384183 140 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms