Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.59□□□□□ -2.15
MBD3O95983 RN7SKP299-201ENST00000606679 301 ntBASIC1.59□□□□□ -2.15
MBD3O95983 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.59□□□□□ -2.15
MBD3O95983 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
MBD3O95983 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.58□□□□□ -2.16
MBD3O95983 RNU6-562P-201ENST00000362731 107 ntBASIC1.58□□□□□ -2.16
MBD3O95983 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
MBD3O95983 RNU6-955P-201ENST00000410497 104 ntBASIC1.58□□□□□ -2.16
MBD3O95983 AL513185.2-201ENST00000425543 193 ntBASIC1.58□□□□□ -2.16
MBD3O95983 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.58□□□□□ -2.16
MBD3O95983 AC015922.2-201ENST00000435593 184 ntBASIC1.58□□□□□ -2.16
MBD3O95983 MTCO2P16-201ENST00000436962 677 ntBASIC1.58□□□□□ -2.16
MBD3O95983 MTCO1P44-201ENST00000441935 243 ntBASIC1.58□□□□□ -2.16
MBD3O95983 AL357134.1-201ENST00000445848 426 ntBASIC1.58□□□□□ -2.16
MBD3O95983 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.58□□□□□ -2.16
MBD3O95983 RNU7-14P-201ENST00000459331 62 ntBASIC1.58□□□□□ -2.16
MBD3O95983 AC130509.1-201ENST00000464158 433 ntBASIC1.58□□□□□ -2.16
MBD3O95983 Y_RNA.654-201ENST00000497848 106 ntBASIC1.58□□□□□ -2.16
MBD3O95983 AC021146.2-201ENST00000504736 556 ntBASIC1.58□□□□□ -2.16
MBD3O95983 RNU5F-4P-201ENST00000516581 114 ntBASIC1.58□□□□□ -2.16
MBD3O95983 SNORD60.2-201ENST00000516883 86 ntBASIC1.58□□□□□ -2.16
MBD3O95983 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.58□□□□□ -2.16
MBD3O95983 SCOCP1-201ENST00000554676 349 ntBASIC1.58□□□□□ -2.16
MBD3O95983 AC068338.1-201ENST00000565567 176 ntBASIC1.58□□□□□ -2.16
MBD3O95983 MIR3124-201ENST00000582636 67 ntBASIC1.58□□□□□ -2.16
MBD3O95983 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.58□□□□□ -2.16
MBD3O95983 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.58□□□□□ -2.16
MBD3O95983 AC139792.3-201ENST00000623525 224 ntBASIC1.58□□□□□ -2.16
MBD3O95983 AL359697.1-201ENST00000624879 587 ntBASIC1.58□□□□□ -2.16
MBD3O95983 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
MBD3O95983 AC009541.1-201ENST00000438279 2662 ntBASIC1.57□□□□□ -2.16
MBD3O95983 MIR424-201ENST00000362227 98 ntBASIC1.57□□□□□ -2.16
MBD3O95983 RNU6-1329P-201ENST00000365664 107 ntBASIC1.57□□□□□ -2.16
MBD3O95983 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
MBD3O95983 AL663109.1-201ENST00000411498 844 ntBASIC1.57□□□□□ -2.16
MBD3O95983 TIMM9P3-201ENST00000428659 274 ntBASIC1.57□□□□□ -2.16
MBD3O95983 SNRPEP8-201ENST00000442866 260 ntBASIC1.57□□□□□ -2.16
MBD3O95983 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.57□□□□□ -2.16
MBD3O95983 U8.21-201ENST00000459536 136 ntBASIC1.57□□□□□ -2.16
MBD3O95983 AC087477.1-201ENST00000465747 340 ntBASIC1.57□□□□□ -2.16
MBD3O95983 AC025465.4-201ENST00000513422 638 ntBASIC1.57□□□□□ -2.16
MBD3O95983 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
MBD3O95983 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.57□□□□□ -2.16
MBD3O95983 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.57□□□□□ -2.16
MBD3O95983 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
MBD3O95983 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
MBD3O95983 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
MBD3O95983 AC100830.2-201ENST00000581636 240 ntBASIC1.57□□□□□ -2.16
MBD3O95983 AL158827.2-201ENST00000602494 330 ntBASIC1.57□□□□□ -2.16
MBD3O95983 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.57□□□□□ -2.16
MBD3O95983 MIR7843-201ENST00000622274 79 ntBASIC1.57□□□□□ -2.16
MBD3O95983 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.57□□□□□ -2.16
MBD3O95983 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.57□□□□□ -2.16
MBD3O95983 AL691447.3-201ENST00000635020 330 ntBASIC1.57□□□□□ -2.16
MBD3O95983 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.57□□□□□ -2.16
MBD3O95983 AC121333.1-201ENST00000567488 2709 ntBASIC1.56□□□□□ -2.16
MBD3O95983 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MBD3O95983 RNU6-112P-201ENST00000363599 104 ntBASIC1.56□□□□□ -2.16
MBD3O95983 Y_RNA.359-201ENST00000365498 102 ntBASIC1.56□□□□□ -2.16
MBD3O95983 SNORD73A-201ENST00000386062 65 ntBASIC1.56□□□□□ -2.16
MBD3O95983 SNORA12.2-201ENST00000391040 156 ntBASIC1.56□□□□□ -2.16
MBD3O95983 MIR300-201ENST00000401138 83 ntBASIC1.56□□□□□ -2.16
MBD3O95983 MIR208B-201ENST00000401172 77 ntBASIC1.56□□□□□ -2.16
MBD3O95983 AC139712.2-201ENST00000424302 339 ntBASIC1.56□□□□□ -2.16
MBD3O95983 TPT1P7-201ENST00000458300 517 ntBASIC1.56□□□□□ -2.16
MBD3O95983 AC010409.1-201ENST00000487382 476 ntBASIC1.56□□□□□ -2.16
MBD3O95983 FAM206BP-201ENST00000510179 541 ntBASIC1.56□□□□□ -2.16
MBD3O95983 RNU6-405P-201ENST00000516637 110 ntBASIC1.56□□□□□ -2.16
MBD3O95983 SUMO2P18-201ENST00000518873 252 ntBASIC1.56□□□□□ -2.16
MBD3O95983 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.56□□□□□ -2.16
MBD3O95983 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.56□□□□□ -2.16
MBD3O95983 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.56□□□□□ -2.16
MBD3O95983 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MBD3O95983 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.56□□□□□ -2.16
MBD3O95983 RNU4-13P-201ENST00000364019 141 ntBASIC1.55□□□□□ -2.16
MBD3O95983 RNU6-338P-201ENST00000383888 105 ntBASIC1.55□□□□□ -2.16
MBD3O95983 SNORA69-201ENST00000383895 132 ntBASIC1.55□□□□□ -2.16
MBD3O95983 SNORA36A-201ENST00000384221 132 ntBASIC1.55□□□□□ -2.16
MBD3O95983 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
MBD3O95983 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
MBD3O95983 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.55□□□□□ -2.16
MBD3O95983 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.55□□□□□ -2.16
MBD3O95983 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.55□□□□□ -2.16
MBD3O95983 AL359672.1-201ENST00000442302 409 ntBASIC1.55□□□□□ -2.16
MBD3O95983 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.55□□□□□ -2.16
MBD3O95983 AC010095.1-201ENST00000443543 144 ntBASIC1.55□□□□□ -2.16
MBD3O95983 RNU6-1208P-201ENST00000459588 107 ntBASIC1.55□□□□□ -2.16
MBD3O95983 RPL9P9-202ENST00000466501 579 ntBASIC1.55□□□□□ -2.16
MBD3O95983 AC067942.3-201ENST00000512025 362 ntBASIC1.55□□□□□ -2.16
MBD3O95983 RNA5SP401-201ENST00000515920 127 ntBASIC1.55□□□□□ -2.16
MBD3O95983 RNU2-34P-201ENST00000516534 121 ntBASIC1.55□□□□□ -2.16
MBD3O95983 AC026470.2-201ENST00000561492 181 ntBASIC1.55□□□□□ -2.16
MBD3O95983 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.55□□□□□ -2.16
MBD3O95983 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.55□□□□□ -2.16
MBD3O95983 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.55□□□□□ -2.16
MBD3O95983 AC090517.1-201ENST00000569307 266 ntBASIC1.55□□□□□ -2.16
MBD3O95983 AC010620.1-201ENST00000601088 1102 ntBASIC1.55□□□□□ -2.16
MBD3O95983 AC092747.3-201ENST00000603769 301 ntBASIC1.55□□□□□ -2.16
MBD3O95983 MIR8074-201ENST00000615081 81 ntBASIC1.55□□□□□ -2.16
MBD3O95983 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms