Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
SNX4O95219 AC009033.1-201ENST00000624279 431 ntBASIC1.22□□□□□ -2.21
SNX4O95219 SNORA29-201ENST00000384183 140 ntBASIC1.21□□□□□ -2.22
SNX4O95219 MIR515-2-201ENST00000384883 83 ntBASIC1.21□□□□□ -2.22
SNX4O95219 MIR515-1-201ENST00000384884 83 ntBASIC1.21□□□□□ -2.22
SNX4O95219 MIR513A1-201ENST00000385138 129 ntBASIC1.21□□□□□ -2.22
SNX4O95219 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SNX4O95219 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.21□□□□□ -2.22
SNX4O95219 AC009961.2-201ENST00000435771 251 ntBASIC1.21□□□□□ -2.22
SNX4O95219 AC073910.1-201ENST00000445047 438 ntBASIC1.21□□□□□ -2.22
SNX4O95219 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.21□□□□□ -2.22
SNX4O95219 RPS29P15-201ENST00000458329 171 ntBASIC1.21□□□□□ -2.22
SNX4O95219 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
SNX4O95219 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
SNX4O95219 AL133373.1-201ENST00000497098 94 ntBASIC1.21□□□□□ -2.22
SNX4O95219 MTCYBP18-201ENST00000501056 747 ntBASIC1.21□□□□□ -2.22
SNX4O95219 RNU6-1053P-201ENST00000515930 101 ntBASIC1.21□□□□□ -2.22
SNX4O95219 RNA5SP384-201ENST00000516615 116 ntBASIC1.21□□□□□ -2.22
SNX4O95219 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.21□□□□□ -2.22
SNX4O95219 MTCO3P23-201ENST00000561363 289 ntBASIC1.21□□□□□ -2.22
SNX4O95219 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.21□□□□□ -2.22
SNX4O95219 MIR4753-201ENST00000585119 83 ntBASIC1.21□□□□□ -2.22
SNX4O95219 NIFKP6-201ENST00000598115 845 ntBASIC1.21□□□□□ -2.22
SNX4O95219 AC002044.1-201ENST00000606707 158 ntBASIC1.21□□□□□ -2.22
SNX4O95219 AC040896.1-201ENST00000613819 479 ntBASIC1.21□□□□□ -2.22
SNX4O95219 AP001506.1-201ENST00000615444 211 ntBASIC1.21□□□□□ -2.22
SNX4O95219 AC126177.8-201ENST00000618339 1015 ntBASIC1.21□□□□□ -2.22
SNX4O95219 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.21□□□□□ -2.22
SNX4O95219 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SNX4O95219 RNU6-266P-201ENST00000364225 107 ntBASIC1.2□□□□□ -2.22
SNX4O95219 RNU6-1106P-201ENST00000390845 107 ntBASIC1.2□□□□□ -2.22
SNX4O95219 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.2□□□□□ -2.22
SNX4O95219 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.2□□□□□ -2.22
SNX4O95219 Z82205.1-201ENST00000428456 297 ntBASIC1.2□□□□□ -2.22
SNX4O95219 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.2□□□□□ -2.22
SNX4O95219 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.2□□□□□ -2.22
SNX4O95219 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
SNX4O95219 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.2□□□□□ -2.22
SNX4O95219 ARL2BPP4-201ENST00000506854 471 ntBASIC1.2□□□□□ -2.22
SNX4O95219 RN7SKP88-201ENST00000516847 250 ntBASIC1.2□□□□□ -2.22
SNX4O95219 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.2□□□□□ -2.22
SNX4O95219 AC106038.2-201ENST00000520706 568 ntBASIC1.2□□□□□ -2.22
SNX4O95219 SNORA59B-202ENST00000578183 701 ntBASIC1.2□□□□□ -2.22
SNX4O95219 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.2□□□□□ -2.22
SNX4O95219 AC090616.2-202ENST00000584248 222 ntBASIC1.2□□□□□ -2.22
SNX4O95219 MIR548AB-201ENST00000584917 84 ntBASIC1.2□□□□□ -2.22
SNX4O95219 MZT1P2-201ENST00000604387 248 ntBASIC1.2□□□□□ -2.22
SNX4O95219 AL359821.1-201ENST00000605519 182 ntBASIC1.2□□□□□ -2.22
SNX4O95219 AL365434.2-201ENST00000607979 234 ntBASIC1.2□□□□□ -2.22
SNX4O95219 7SK.8-201ENST00000612110 250 ntBASIC1.2□□□□□ -2.22
SNX4O95219 7SK.11-201ENST00000615477 250 ntBASIC1.2□□□□□ -2.22
SNX4O95219 AL157834.3-201ENST00000615543 103 ntBASIC1.2□□□□□ -2.22
SNX4O95219 AC022960.3-201ENST00000619794 441 ntBASIC1.2□□□□□ -2.22
SNX4O95219 7SK.13-201ENST00000622040 250 ntBASIC1.2□□□□□ -2.22
SNX4O95219 BX322639.1-202ENST00000423987 2213 ntBASIC1.2□□□□□ -2.22
SNX4O95219 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
SNX4O95219 RNU6-1127P-201ENST00000384580 107 ntBASIC1.19□□□□□ -2.22
SNX4O95219 MIR1-2-201ENST00000384961 85 ntBASIC1.19□□□□□ -2.22
SNX4O95219 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
SNX4O95219 SNORA16.2-201ENST00000390991 127 ntBASIC1.19□□□□□ -2.22
SNX4O95219 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
SNX4O95219 RNU6-1093P-201ENST00000391194 107 ntBASIC1.19□□□□□ -2.22
SNX4O95219 MIR1283-1-201ENST00000408494 87 ntBASIC1.19□□□□□ -2.22
SNX4O95219 AC090960.1-201ENST00000421072 306 ntBASIC1.19□□□□□ -2.22
SNX4O95219 AC060773.1-201ENST00000421698 310 ntBASIC1.19□□□□□ -2.22
SNX4O95219 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.19□□□□□ -2.22
SNX4O95219 AL133217.1-201ENST00000450980 425 ntBASIC1.19□□□□□ -2.22
SNX4O95219 AL033528.1-201ENST00000453780 140 ntBASIC1.19□□□□□ -2.22
SNX4O95219 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.19□□□□□ -2.22
SNX4O95219 AC091874.1-201ENST00000511402 339 ntBASIC1.19□□□□□ -2.22
SNX4O95219 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
SNX4O95219 AC016256.1-201ENST00000547971 354 ntBASIC1.19□□□□□ -2.22
SNX4O95219 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.19□□□□□ -2.22
SNX4O95219 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.19□□□□□ -2.22
SNX4O95219 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.19□□□□□ -2.22
SNX4O95219 HSPE1P19-201ENST00000603327 295 ntBASIC1.19□□□□□ -2.22
SNX4O95219 AC245014.2-201ENST00000603689 287 ntBASIC1.19□□□□□ -2.22
SNX4O95219 AC011458.1-201ENST00000604034 617 ntBASIC1.19□□□□□ -2.22
SNX4O95219 Z84480.1-201ENST00000605131 311 ntBASIC1.19□□□□□ -2.22
SNX4O95219 AC246785.4-201ENST00000605374 287 ntBASIC1.19□□□□□ -2.22
SNX4O95219 AL603839.4-201ENST00000624658 1005 ntBASIC1.19□□□□□ -2.22
SNX4O95219 RNU6-545P-201ENST00000362681 104 ntBASIC1.18□□□□□ -2.22
SNX4O95219 RNU1-22P-201ENST00000363334 158 ntBASIC1.18□□□□□ -2.22
SNX4O95219 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
SNX4O95219 RNU6-418P-201ENST00000384035 107 ntBASIC1.18□□□□□ -2.22
SNX4O95219 RNU6-968P-201ENST00000384076 107 ntBASIC1.18□□□□□ -2.22
SNX4O95219 RNU6-195P-201ENST00000411352 109 ntBASIC1.18□□□□□ -2.22
SNX4O95219 HMGN1P14-201ENST00000412459 517 ntBASIC1.18□□□□□ -2.22
SNX4O95219 USP9YP14-201ENST00000430663 563 ntBASIC1.18□□□□□ -2.22
SNX4O95219 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.18□□□□□ -2.22
SNX4O95219 SCARNA18-201ENST00000459004 134 ntBASIC1.18□□□□□ -2.22
SNX4O95219 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.18□□□□□ -2.22
SNX4O95219 AC010486.2-201ENST00000505572 483 ntBASIC1.18□□□□□ -2.22
SNX4O95219 RNU6-1146P-201ENST00000516282 102 ntBASIC1.18□□□□□ -2.22
SNX4O95219 RNU6-948P-201ENST00000516374 107 ntBASIC1.18□□□□□ -2.22
SNX4O95219 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.18□□□□□ -2.22
SNX4O95219 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
SNX4O95219 MIR338-201ENST00000636369 67 ntBASIC1.18□□□□□ -2.22
SNX4O95219 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SNX4O95219 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms