Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC008628.2-201ENST00000502605 298 ntBASIC1.25□□□□□ -2.21
SEMA3DO95025 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.25□□□□□ -2.21
SEMA3DO95025 RNU5F-4P-201ENST00000516581 114 ntBASIC1.25□□□□□ -2.21
SEMA3DO95025 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.25□□□□□ -2.21
SEMA3DO95025 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.25□□□□□ -2.21
SEMA3DO95025 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
SEMA3DO95025 CYP4A27P-201ENST00000567218 190 ntBASIC1.25□□□□□ -2.21
SEMA3DO95025 SNORA59B-202ENST00000578183 701 ntBASIC1.25□□□□□ -2.21
SEMA3DO95025 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.25□□□□□ -2.21
SEMA3DO95025 AC008088.1-201ENST00000580993 280 ntBASIC1.25□□□□□ -2.21
SEMA3DO95025 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
SEMA3DO95025 Z99497.2-201ENST00000603634 310 ntBASIC1.25□□□□□ -2.21
SEMA3DO95025 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.25□□□□□ -2.21
SEMA3DO95025 MIR8074-201ENST00000615081 81 ntBASIC1.25□□□□□ -2.21
SEMA3DO95025 AC233981.2-201ENST00000611524 1614 ntBASIC1.25□□□□□ -2.21
SEMA3DO95025 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SEMA3DO95025 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.24□□□□□ -2.21
SEMA3DO95025 RNU5A-6P-201ENST00000384136 116 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 SNORD116-8-201ENST00000384365 95 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 MIR208B-201ENST00000401172 77 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 AP000275.1-201ENST00000411943 390 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.24□□□□□ -2.21
SEMA3DO95025 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.24□□□□□ -2.21
SEMA3DO95025 AC073464.1-201ENST00000429823 534 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 AC002486.1-201ENST00000435098 391 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SEMA3DO95025 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.24□□□□□ -2.21
SEMA3DO95025 AL163973.1-201ENST00000484753 577 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.24□□□□□ -2.21
SEMA3DO95025 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.24□□□□□ -2.21
SEMA3DO95025 RNU6-1038P-201ENST00000516516 104 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 MTND4P7-201ENST00000523876 130 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.24□□□□□ -2.21
SEMA3DO95025 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 AC004223.2-201ENST00000590309 544 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 AC073648.5-201ENST00000603502 305 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 AC007684.1-201ENST00000609671 477 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.24□□□□□ -2.21
SEMA3DO95025 Z69908.1-201ENST00000622603 247 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 AC078883.4-201ENST00000623218 367 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 AC005609.4-201ENST00000625071 447 ntBASIC1.24□□□□□ -2.21
SEMA3DO95025 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
SEMA3DO95025 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.23□□□□□ -2.21
SEMA3DO95025 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
SEMA3DO95025 RNU6-112P-201ENST00000363599 104 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 RNU6-1103P-201ENST00000384150 107 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SEMA3DO95025 AL606923.1-201ENST00000406616 190 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 RPL21P111-201ENST00000418453 477 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 AL606489.2-201ENST00000433886 234 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 MTCO1P19-201ENST00000443487 500 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.23□□□□□ -2.21
SEMA3DO95025 AC004223.1-201ENST00000479840 271 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.23□□□□□ -2.21
SEMA3DO95025 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SEMA3DO95025 AC010493.1-201ENST00000513479 292 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 RNU1-92P-201ENST00000517017 135 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 RNU6-323P-201ENST00000521915 107 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 AP003033.1-201ENST00000527244 415 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 AC090517.1-201ENST00000569307 266 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 MIR3941-201ENST00000582572 103 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 MIR4424-201ENST00000585257 86 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 VN1R80P-201ENST00000597126 338 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 BNIP3P10-201ENST00000605360 577 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 AC008147.4-201ENST00000617570 1204 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 AC068205.3-201ENST00000636385 468 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.23□□□□□ -2.21
SEMA3DO95025 MTND5P9-201ENST00000503854 1755 ntBASIC1.23□□□□□ -2.21
SEMA3DO95025 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.23□□□□□ -2.21
SEMA3DO95025 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.23□□□□□ -2.21
SEMA3DO95025 Y_RNA.359-201ENST00000365498 102 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 RNU6-296P-201ENST00000384608 107 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
SEMA3DO95025 RNU4-62P-201ENST00000410125 130 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.22□□□□□ -2.21
SEMA3DO95025 AC012306.1-201ENST00000423267 114 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.22□□□□□ -2.21
SEMA3DO95025 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SEMA3DO95025 MTCO2P3-201ENST00000442543 421 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 AC245517.4-201ENST00000448601 281 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 RPS29P29-201ENST00000456396 171 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 snoU13.6-201ENST00000458785 104 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 RN7SKP210-201ENST00000459176 261 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 Y_RNA.638-201ENST00000459374 113 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 RNU7-138P-201ENST00000459479 64 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 RPS3AP17-201ENST00000472594 777 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.22□□□□□ -2.21
SEMA3DO95025 SNORA14.1-201ENST00000516113 141 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.22□□□□□ -2.21
SEMA3DO95025 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.22□□□□□ -2.21
SEMA3DO95025 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.22□□□□□ -2.21
SEMA3DO95025 AC009994.1-201ENST00000606889 253 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.22□□□□□ -2.21
SEMA3DO95025 AC009541.1-201ENST00000438279 2662 ntBASIC1.22□□□□□ -2.21
SEMA3DO95025 Y_RNA.1-201ENST00000352915 104 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 238.8 ms