Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 Y_RNA.319-201ENST00000365138 92 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 SNORA18.3-201ENST00000384122 132 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 RNU6-851P-201ENST00000384565 107 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 RNU4-70P-201ENST00000384579 139 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 MIR10B-201ENST00000385011 110 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 SNORA26.3-201ENST00000391119 136 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 WARS2P1-201ENST00000429678 537 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 AL135938.1-201ENST00000443141 297 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 RPL39P29-201ENST00000447779 157 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 AP002884.2-201ENST00000471647 395 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 AC083906.5-201ENST00000503722 328 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 RNU6-496P-201ENST00000516145 99 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 Y_RNA.700-201ENST00000516806 100 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 AC090897.2-201ENST00000581715 130 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 AC009779.6-201ENST00000603972 165 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 AC005296.1-201ENST00000616145 209 ntBASIC3.71□□□□□ -1.82
VAMP4O75379 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAMP4O75379 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAMP4O75379 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAMP4O75379 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.7□□□□□ -1.82
VAMP4O75379 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
VAMP4O75379 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
VAMP4O75379 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VAMP4O75379 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VAMP4O75379 RNY1-201ENST00000364228 113 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 RNU6-1027P-201ENST00000383998 107 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 Y_RNA.785-201ENST00000384290 109 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 RNU6-937P-201ENST00000384325 106 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 Y_RNA.541-201ENST00000384640 113 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 SNORD12B-201ENST00000410433 91 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 RNA5SP38-201ENST00000410750 119 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 RPS26P42-201ENST00000413485 326 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.7□□□□□ -1.82
VAMP4O75379 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.7□□□□□ -1.82
VAMP4O75379 snoU13.28-201ENST00000459235 104 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 SNORD19.2-201ENST00000516978 73 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.7□□□□□ -1.82
VAMP4O75379 HMGN2P15-201ENST00000585707 270 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 AC011471.1-201ENST00000585766 187 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 AC010900.2-201ENST00000604508 210 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 BX284668.6-201ENST00000606899 438 ntBASIC3.7□□□□□ -1.82
VAMP4O75379 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.7□□□□□ -1.82
VAMP4O75379 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.7□□□□□ -1.82
VAMP4O75379 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
VAMP4O75379 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.7□□□□□ -1.82
VAMP4O75379 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
VAMP4O75379 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.69□□□□□ -1.82
VAMP4O75379 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VAMP4O75379 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VAMP4O75379 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VAMP4O75379 SNORD27-201ENST00000363981 72 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 SNORA9.2-201ENST00000365361 133 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 RNU6-338P-201ENST00000383888 105 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 RNU6-1145P-201ENST00000384246 107 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 AL603910.2-201ENST00000407268 136 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 RNU2-20P-201ENST00000410425 191 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 Z92545.1-201ENST00000411782 234 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.69□□□□□ -1.82
VAMP4O75379 SCARNA13-201ENST00000516672 275 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 RNA5SP54-201ENST00000516951 92 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.69□□□□□ -1.82
VAMP4O75379 AC115990.1-201ENST00000526957 301 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.69□□□□□ -1.82
VAMP4O75379 AC011476.5-201ENST00000615594 130 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.69□□□□□ -1.82
VAMP4O75379 AC004944.1-201ENST00000517807 3059 ntBASIC3.69□□□□□ -1.82
VAMP4O75379 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VAMP4O75379 RBBP8P1-201ENST00000449447 1844 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 Y_RNA.16-201ENST00000362421 102 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 RNU4-90P-201ENST00000362773 141 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 SNORA14A-201ENST00000364773 135 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 CD24P4-201ENST00000382840 243 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 MIR329-1-201ENST00000385028 80 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 RNU5A-5P-201ENST00000411054 116 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 AC023141.4-201ENST00000412031 328 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 AC012306.1-201ENST00000423267 114 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 AC022018.1-201ENST00000430685 241 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.68□□□□□ -1.82
VAMP4O75379 AL161651.1-201ENST00000440882 223 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 SNRPGP7-201ENST00000469016 106 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 RNU6-138P-201ENST00000515952 107 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 RNU4-71P-201ENST00000516258 113 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.68□□□□□ -1.82
VAMP4O75379 AK6P2-201ENST00000549020 471 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 EIF4BP1-201ENST00000554881 351 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.68□□□□□ -1.82
VAMP4O75379 AC098479.1-201ENST00000609225 154 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 AC090115.4-201ENST00000609970 188 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 AL359198.2-201ENST00000611836 194 ntBASIC3.68□□□□□ -1.82
VAMP4O75379 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.68□□□□□ -1.82
VAMP4O75379 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VAMP4O75379 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VAMP4O75379 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.68□□□□□ -1.82
VAMP4O75379 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.67□□□□□ -1.82
VAMP4O75379 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAMP4O75379 AC002543.1-201ENST00000299783 1954 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 RNU6-280P-201ENST00000364145 104 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 Y_RNA.602-201ENST00000410535 92 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 RNU2-14P-201ENST00000411053 191 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms