Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SHOXO15266 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHOXO15266 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHOXO15266 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHOXO15266 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.35□□□□□ -1.87
SHOXO15266 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.35□□□□□ -1.87
SHOXO15266 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHOXO15266 SNORD115-30-201ENST00000364117 82 ntBASIC3.35□□□□□ -1.87
SHOXO15266 MIR586-201ENST00000385035 97 ntBASIC3.35□□□□□ -1.87
SHOXO15266 RNA5SP504-201ENST00000410676 117 ntBASIC3.35□□□□□ -1.87
SHOXO15266 SNORA57.3-201ENST00000411095 141 ntBASIC3.35□□□□□ -1.87
SHOXO15266 YME1L1P1-201ENST00000429435 297 ntBASIC3.35□□□□□ -1.87
SHOXO15266 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.35□□□□□ -1.87
SHOXO15266 AC010401.1-201ENST00000463867 348 ntBASIC3.35□□□□□ -1.87
SHOXO15266 AC109327.1-201ENST00000471666 403 ntBASIC3.35□□□□□ -1.87
SHOXO15266 RN7SL442P-201ENST00000473804 320 ntBASIC3.35□□□□□ -1.87
SHOXO15266 RPS29P2-201ENST00000479278 136 ntBASIC3.35□□□□□ -1.87
SHOXO15266 RPL29P14-201ENST00000495837 428 ntBASIC3.35□□□□□ -1.87
SHOXO15266 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.35□□□□□ -1.87
SHOXO15266 AC074198.2-201ENST00000508153 258 ntBASIC3.35□□□□□ -1.87
SHOXO15266 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.35□□□□□ -1.87
SHOXO15266 SNORA70.12-201ENST00000516084 153 ntBASIC3.35□□□□□ -1.87
SHOXO15266 RNY3P16-201ENST00000516338 101 ntBASIC3.35□□□□□ -1.87
SHOXO15266 RNU5F-4P-201ENST00000516581 114 ntBASIC3.35□□□□□ -1.87
SHOXO15266 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.35□□□□□ -1.87
SHOXO15266 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.35□□□□□ -1.87
SHOXO15266 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.35□□□□□ -1.87
SHOXO15266 AL008718.3-201ENST00000610217 321 ntBASIC3.35□□□□□ -1.87
SHOXO15266 AC090517.3-201ENST00000625170 141 ntBASIC3.35□□□□□ -1.87
SHOXO15266 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.35□□□□□ -1.87
SHOXO15266 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.35□□□□□ -1.87
SHOXO15266 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.35□□□□□ -1.87
SHOXO15266 GABRG2-229ENST00000641017 3628 ntBASIC3.34□□□□□ -1.87
SHOXO15266 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SHOXO15266 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHOXO15266 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHOXO15266 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.34□□□□□ -1.87
SHOXO15266 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHOXO15266 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SHOXO15266 RNU6-653P-201ENST00000363074 106 ntBASIC3.34□□□□□ -1.87
SHOXO15266 SNORD35B-201ENST00000363660 87 ntBASIC3.34□□□□□ -1.87
SHOXO15266 SNORA73.2-201ENST00000364946 201 ntBASIC3.34□□□□□ -1.87
SHOXO15266 RNU4-17P-201ENST00000365598 141 ntBASIC3.34□□□□□ -1.87
SHOXO15266 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHOXO15266 SNORA12-201ENST00000391162 147 ntBASIC3.34□□□□□ -1.87
SHOXO15266 RBMY2UP-201ENST00000453474 324 ntBASIC3.34□□□□□ -1.87
SHOXO15266 AC110768.1-201ENST00000509222 400 ntBASIC3.34□□□□□ -1.87
SHOXO15266 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.34□□□□□ -1.87
SHOXO15266 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.34□□□□□ -1.87
SHOXO15266 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.34□□□□□ -1.87
SHOXO15266 MIR4308-201ENST00000580634 81 ntBASIC3.34□□□□□ -1.87
SHOXO15266 AL133393.1-201ENST00000603277 287 ntBASIC3.34□□□□□ -1.87
SHOXO15266 AC008745.1-201ENST00000604064 271 ntBASIC3.34□□□□□ -1.87
SHOXO15266 AL356218.2-201ENST00000605264 187 ntBASIC3.34□□□□□ -1.87
SHOXO15266 AC107294.3-201ENST00000609211 526 ntBASIC3.34□□□□□ -1.87
SHOXO15266 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHOXO15266 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.34□□□□□ -1.87
SHOXO15266 AL513302.2-201ENST00000562313 1842 ntBASIC3.34□□□□□ -1.87
SHOXO15266 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.88
SHOXO15266 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHOXO15266 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SHOXO15266 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
SHOXO15266 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHOXO15266 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHOXO15266 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.33□□□□□ -1.88
SHOXO15266 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SHOXO15266 RNU6-1305P-201ENST00000364353 104 ntBASIC3.33□□□□□ -1.88
SHOXO15266 SNORD32B-201ENST00000364460 84 ntBASIC3.33□□□□□ -1.88
SHOXO15266 Y_RNA.243-201ENST00000364481 109 ntBASIC3.33□□□□□ -1.88
SHOXO15266 RNA5SP509-201ENST00000364577 119 ntBASIC3.33□□□□□ -1.88
SHOXO15266 RNY1P5-201ENST00000383890 115 ntBASIC3.33□□□□□ -1.88
SHOXO15266 Y_RNA.506-201ENST00000384494 102 ntBASIC3.33□□□□□ -1.88
SHOXO15266 RNU6-125P-201ENST00000384505 107 ntBASIC3.33□□□□□ -1.88
SHOXO15266 MIR1193-201ENST00000408109 78 ntBASIC3.33□□□□□ -1.88
SHOXO15266 RPL18P10-201ENST00000425606 538 ntBASIC3.33□□□□□ -1.88
SHOXO15266 U3.44-201ENST00000458938 192 ntBASIC3.33□□□□□ -1.88
SHOXO15266 RN7SL691P-201ENST00000494487 301 ntBASIC3.33□□□□□ -1.88
SHOXO15266 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.33□□□□□ -1.88
SHOXO15266 MRPS18CP4-201ENST00000535821 231 ntBASIC3.33□□□□□ -1.88
SHOXO15266 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHOXO15266 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.33□□□□□ -1.88
SHOXO15266 AC083809.1-201ENST00000615051 472 ntBASIC3.33□□□□□ -1.88
SHOXO15266 UCA1.1-201ENST00000620952 75 ntBASIC3.33□□□□□ -1.88
SHOXO15266 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.33□□□□□ -1.88
SHOXO15266 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.33□□□□□ -1.88
SHOXO15266 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
SHOXO15266 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHOXO15266 Y_RNA.7-201ENST00000362352 102 ntBASIC3.32□□□□□ -1.88
SHOXO15266 RNU1-132P-201ENST00000364300 164 ntBASIC3.32□□□□□ -1.88
SHOXO15266 SNORA67.2-201ENST00000384300 149 ntBASIC3.32□□□□□ -1.88
SHOXO15266 MIR300-201ENST00000401138 83 ntBASIC3.32□□□□□ -1.88
SHOXO15266 AL357075.1-201ENST00000404107 726 ntBASIC3.32□□□□□ -1.88
SHOXO15266 AC009969.1-201ENST00000438726 172 ntBASIC3.32□□□□□ -1.88
SHOXO15266 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.32□□□□□ -1.88
SHOXO15266 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.32□□□□□ -1.88
SHOXO15266 AC114982.1-201ENST00000469402 321 ntBASIC3.32□□□□□ -1.88
SHOXO15266 HMGB3P3-201ENST00000510526 400 ntBASIC3.32□□□□□ -1.88
SHOXO15266 SCARNA11.3-201ENST00000517276 130 ntBASIC3.32□□□□□ -1.88
SHOXO15266 AC136628.3-201ENST00000521868 290 ntBASIC3.32□□□□□ -1.88
SHOXO15266 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms