Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC073308.1-201ENST00000623696 305 ntBASIC3.91□□□□□ -1.78
SOX1O00570 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SOX1O00570 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SOX1O00570 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SOX1O00570 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SOX1O00570 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.91□□□□□ -1.78
SOX1O00570 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
SOX1O00570 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
SOX1O00570 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.9□□□□□ -1.78
SOX1O00570 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SOX1O00570 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SOX1O00570 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SOX1O00570 RNU6-801P-201ENST00000364087 105 ntBASIC3.9□□□□□ -1.79
SOX1O00570 RNU6-454P-201ENST00000364292 107 ntBASIC3.9□□□□□ -1.79
SOX1O00570 MIR569-201ENST00000385228 96 ntBASIC3.9□□□□□ -1.79
SOX1O00570 RNU6-381P-201ENST00000391259 108 ntBASIC3.9□□□□□ -1.79
SOX1O00570 AC006445.2-201ENST00000510061 472 ntBASIC3.9□□□□□ -1.79
SOX1O00570 RN7SKP164-201ENST00000516138 266 ntBASIC3.9□□□□□ -1.79
SOX1O00570 AC021269.2-201ENST00000532318 330 ntBASIC3.9□□□□□ -1.79
SOX1O00570 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX1O00570 MIR4431-201ENST00000579990 94 ntBASIC3.9□□□□□ -1.79
SOX1O00570 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.9□□□□□ -1.79
SOX1O00570 AC004825.2-201ENST00000616634 455 ntBASIC3.9□□□□□ -1.79
SOX1O00570 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.9□□□□□ -1.79
SOX1O00570 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SOX1O00570 AC100821.1-201ENST00000523153 2479 ntBASIC3.9□□□□□ -1.79
SOX1O00570 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX1O00570 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SOX1O00570 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SOX1O00570 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SOX1O00570 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SOX1O00570 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SOX1O00570 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SOX1O00570 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SOX1O00570 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SOX1O00570 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.89□□□□□ -1.79
SOX1O00570 MIR422A-201ENST00000362286 90 ntBASIC3.89□□□□□ -1.79
SOX1O00570 RNU6-103P-201ENST00000363686 107 ntBASIC3.89□□□□□ -1.79
SOX1O00570 RNU6-818P-201ENST00000364837 108 ntBASIC3.89□□□□□ -1.79
SOX1O00570 Y_RNA.415-201ENST00000384012 112 ntBASIC3.89□□□□□ -1.79
SOX1O00570 SNORA71B-202ENST00000439232 272 ntBASIC3.89□□□□□ -1.79
SOX1O00570 NDUFS5P3-201ENST00000450668 321 ntBASIC3.89□□□□□ -1.79
SOX1O00570 AC107626.1-201ENST00000471084 183 ntBASIC3.89□□□□□ -1.79
SOX1O00570 AC006445.1-201ENST00000491925 405 ntBASIC3.89□□□□□ -1.79
SOX1O00570 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX1O00570 MIR4744-201ENST00000581563 82 ntBASIC3.89□□□□□ -1.79
SOX1O00570 MIR3609-201ENST00000582661 80 ntBASIC3.89□□□□□ -1.79
SOX1O00570 AC013791.1-201ENST00000616619 62 ntBASIC3.89□□□□□ -1.79
SOX1O00570 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.89□□□□□ -1.79
SOX1O00570 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
SOX1O00570 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SOX1O00570 AL672296.1-201ENST00000427780 2158 ntBASIC3.89□□□□□ -1.79
SOX1O00570 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.89□□□□□ -1.79
SOX1O00570 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SOX1O00570 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SOX1O00570 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SOX1O00570 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.88□□□□□ -1.79
SOX1O00570 AC010332.2-201ENST00000613083 1904 ntBASIC3.88□□□□□ -1.79
SOX1O00570 SNORA54-201ENST00000384281 123 ntBASIC3.88□□□□□ -1.79
SOX1O00570 SNORA40-201ENST00000388090 126 ntBASIC3.88□□□□□ -1.79
SOX1O00570 RNU6-710P-201ENST00000410424 105 ntBASIC3.88□□□□□ -1.79
SOX1O00570 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.88□□□□□ -1.79
SOX1O00570 PPBPP1-201ENST00000510807 373 ntBASIC3.88□□□□□ -1.79
SOX1O00570 RNU6-344P-201ENST00000516635 111 ntBASIC3.88□□□□□ -1.79
SOX1O00570 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.88□□□□□ -1.79
SOX1O00570 AC027176.1-201ENST00000560204 514 ntBASIC3.88□□□□□ -1.79
SOX1O00570 AL034555.1-201ENST00000604816 211 ntBASIC3.88□□□□□ -1.79
SOX1O00570 RNU6-91P-201ENST00000607774 107 ntBASIC3.88□□□□□ -1.79
SOX1O00570 PCGEM1.1-201ENST00000613431 131 ntBASIC3.88□□□□□ -1.79
SOX1O00570 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.88□□□□□ -1.79
SOX1O00570 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.88□□□□□ -1.79
SOX1O00570 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SOX1O00570 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SOX1O00570 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
SOX1O00570 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SOX1O00570 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.87□□□□□ -1.79
SOX1O00570 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SOX1O00570 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SOX1O00570 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.87□□□□□ -1.79
SOX1O00570 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
SOX1O00570 RNU6-19P-201ENST00000384718 107 ntBASIC3.87□□□□□ -1.79
SOX1O00570 RNU6-376P-201ENST00000384731 106 ntBASIC3.87□□□□□ -1.79
SOX1O00570 RNU6-578P-201ENST00000390980 103 ntBASIC3.87□□□□□ -1.79
SOX1O00570 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.87□□□□□ -1.79
SOX1O00570 AC006028.1-201ENST00000438379 402 ntBASIC3.87□□□□□ -1.79
SOX1O00570 RNA5SP310-201ENST00000459084 116 ntBASIC3.87□□□□□ -1.79
SOX1O00570 RPL31P41-201ENST00000477967 372 ntBASIC3.87□□□□□ -1.79
SOX1O00570 SNORD19.2-201ENST00000516978 73 ntBASIC3.87□□□□□ -1.79
SOX1O00570 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.87□□□□□ -1.79
SOX1O00570 AL360157.1-201ENST00000565962 87 ntBASIC3.87□□□□□ -1.79
SOX1O00570 MIR3162-201ENST00000581818 82 ntBASIC3.87□□□□□ -1.79
SOX1O00570 HMGN2P15-201ENST00000585707 270 ntBASIC3.87□□□□□ -1.79
SOX1O00570 SNORD11B-201ENST00000607707 90 ntBASIC3.87□□□□□ -1.79
SOX1O00570 MIR7702-201ENST00000621931 59 ntBASIC3.87□□□□□ -1.79
SOX1O00570 AC018692.3-201ENST00000623929 123 ntBASIC3.87□□□□□ -1.79
SOX1O00570 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.87□□□□□ -1.79
SOX1O00570 AC010329.5-201ENST00000623497 2174 ntBASIC3.87□□□□□ -1.79
SOX1O00570 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SOX1O00570 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SOX1O00570 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms