Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC234772.3-201ENST00000602277 528 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 AC064807.4-201ENST00000607201 407 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 AC124016.2-201ENST00000610058 665 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 RMST_7.1-201ENST00000621935 268 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU6-418P-201ENST00000384035 107 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU2-42P-201ENST00000410697 113 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU6-57P-201ENST00000411348 103 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 ZNF886P-201ENST00000450781 723 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 ELOCP24-201ENST00000456370 334 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 AC119751.4-201ENST00000507498 357 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 AC112206.3-201ENST00000514578 389 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU6-1053P-201ENST00000515930 101 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU6-677P-201ENST00000516914 101 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 ZNF321P-202ENST00000550843 495 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR4524B-201ENST00000581569 115 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR4305-201ENST00000583252 102 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 RPL17P51-201ENST00000605218 238 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 AL031775.1-201ENST00000607014 887 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 AC007014.2-201ENST00000615581 479 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 AC022709.1-201ENST00000615967 87 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 AC007742.2-201ENST00000618226 398 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 AP000484.1-201ENST00000620067 1252 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR6079-201ENST00000635807 62 ntBASIC-0.4□□□□□ -2.47
CHKB-CPT1BH3BT56 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.41□□□□□ -2.47
CHKB-CPT1BH3BT56 U8.7-201ENST00000364940 136 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 RNA5SP467-201ENST00000391274 118 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 AC007283.2-201ENST00000424739 197 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 AL356583.2-201ENST00000426536 280 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 AL445305.1-201ENST00000432577 575 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 AC093019.1-201ENST00000443135 252 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 SEPT14P24-201ENST00000447236 180 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 AC016717.1-201ENST00000448918 286 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 RPL23AP54-201ENST00000495129 419 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 AC010469.2-201ENST00000496412 480 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 RBBP4P6-201ENST00000508098 202 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 AC074133.1-201ENST00000515696 183 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 MIR4298-201ENST00000584380 73 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 AL078603.1-201ENST00000603824 313 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 uc_338.34-201ENST00000617467 174 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 AC024940.5-201ENST00000622889 474 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 AC006927.4-201ENST00000639187 543 ntBASIC-0.41□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-853P-201ENST00000364306 107 ntBASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 AC036111.3-201ENST00000526389 112 ntBASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 DEFB108A-201ENST00000530110 222 ntBASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 LRRC6P1-201ENST00000532188 885 ntBASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 AC023157.2-201ENST00000540596 141 ntBASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 RPL23AP91-201ENST00000569211 455 ntBASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 AC090186.1-201ENST00000605991 572 ntBASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 MIR6504-201ENST00000613520 61 ntBASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 MIR1295B-201ENST00000636144 60 ntBASIC-0.42□□□□□ -2.48
CHKB-CPT1BH3BT56 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-78P-201ENST00000362897 107 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-384P-201ENST00000364900 104 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 Y_RNA.338-201ENST00000365320 114 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 SMIM11P1-201ENST00000369586 178 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 U6.112-201ENST00000384129 70 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-440P-201ENST00000390882 105 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-994P-201ENST00000410507 111 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 AC092809.3-201ENST00000415453 231 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 AL139396.1-201ENST00000421137 167 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 AC243964.1-201ENST00000441814 261 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 SNORD111.1-201ENST00000516421 86 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 AC021451.1-201ENST00000523498 1129 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 MIR3192-201ENST00000584920 77 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 AC008752.3-201ENST00000588113 712 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 AC099654.8-201ENST00000637757 681 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 U6.108-201ENST00000637764 58 ntBASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.43□□□□□ -2.48
CHKB-CPT1BH3BT56 SNORD118-201ENST00000363593 134 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 RNA5SP128-201ENST00000365305 116 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 SNORD111-201ENST00000408139 94 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 MIR1276-201ENST00000408707 83 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 SNORA11-201ENST00000408789 128 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AL121578.1-201ENST00000428051 892 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms