Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AL606489.2-201ENST00000433886 234 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.13□□□□□ -2.23
SMKR1H3BMG3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.13□□□□□ -2.23
SMKR1H3BMG3 RNU6-956P-201ENST00000458868 103 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 U8.21-201ENST00000459536 136 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 HMGB1P29-201ENST00000505659 499 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 RNU6-948P-201ENST00000516374 107 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 AP005597.4-201ENST00000526762 229 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 AL512310.1-201ENST00000548639 172 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 AC005668.1-201ENST00000571142 476 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 AC104458.1-201ENST00000608243 463 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.13□□□□□ -2.23
SMKR1H3BMG3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SMKR1H3BMG3 Y_RNA.1-201ENST00000352915 104 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 RNU1-62P-201ENST00000362599 164 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 RNA5SP494-201ENST00000410653 129 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 RPS27P16-201ENST00000425758 201 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 SDAD1P3-201ENST00000427380 333 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 AL135790.2-201ENST00000437701 267 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.12□□□□□ -2.23
SMKR1H3BMG3 AC004386.2-201ENST00000441858 148 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.12□□□□□ -2.23
SMKR1H3BMG3 RPS3AP17-201ENST00000472594 777 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.12□□□□□ -2.23
SMKR1H3BMG3 RN7SKP298-201ENST00000515950 94 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.12□□□□□ -2.23
SMKR1H3BMG3 CENPUP1-201ENST00000526649 1202 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.12□□□□□ -2.23
SMKR1H3BMG3 AP000873.5-201ENST00000533906 236 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.12□□□□□ -2.23
SMKR1H3BMG3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.12□□□□□ -2.23
SMKR1H3BMG3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.12□□□□□ -2.23
SMKR1H3BMG3 MIR5006-201ENST00000583027 110 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 AC016727.2-201ENST00000603988 621 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 IGHVIII-44-202ENST00000636235 289 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 MIR338-201ENST00000636369 67 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 MTND5P35-201ENST00000557537 1720 ntBASIC1.12□□□□□ -2.23
SMKR1H3BMG3 ZNF355P-201ENST00000427301 3216 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SMKR1H3BMG3 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 Y_RNA.296-201ENST00000364930 108 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 RNU6-1329P-201ENST00000365664 107 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 Y_RNA.381-201ENST00000365666 102 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 RNU6-203P-201ENST00000384038 104 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 snoU13.27-201ENST00000459278 104 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 RNU6-498P-201ENST00000459468 107 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 AC114982.1-201ENST00000469402 321 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.11□□□□□ -2.23
SMKR1H3BMG3 SNORA40.12-201ENST00000516329 111 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 RNA5SP61-201ENST00000516453 100 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 SCOCP1-201ENST00000554676 349 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 AC015688.6-201ENST00000577737 104 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 MIR3937-201ENST00000580135 106 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 AC008088.1-201ENST00000580993 280 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 AP003465.2-201ENST00000602571 373 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 AP000907.4-201ENST00000604143 237 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 AL078604.3-201ENST00000615580 211 ntBASIC1.11□□□□□ -2.23
SMKR1H3BMG3 AC006026.1-201ENST00000444025 1803 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 RNU4-82P-201ENST00000362443 140 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 RNU1-42P-201ENST00000364033 160 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 RNU6-975P-201ENST00000384296 105 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 MIR194-1-201ENST00000384892 85 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 SNORD37.1-201ENST00000390968 65 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 MRPL35P1-201ENST00000404272 572 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 SNORA3.2-201ENST00000408221 125 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.1□□□□□ -2.23
SMKR1H3BMG3 RPL7P54-201ENST00000438336 674 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 AC073910.1-201ENST00000445047 438 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 AC019176.1-201ENST00000518519 225 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 AC104576.1-201ENST00000524225 88 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 RRN3P3-201ENST00000549207 578 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 AC025423.5-201ENST00000550230 219 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.1□□□□□ -2.23
SMKR1H3BMG3 FGF7P1-201ENST00000582820 288 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 AC092747.3-201ENST00000603769 301 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 Z69908.1-201ENST00000622603 247 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 AP000648.3-201ENST00000623539 4507 ntBASIC1.1□□□□□ -2.23
SMKR1H3BMG3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SMKR1H3BMG3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 SNORA72.2-201ENST00000365028 127 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
SMKR1H3BMG3 COX6CP10-201ENST00000416832 224 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 EIF1P1-201ENST00000421436 341 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.09□□□□□ -2.23
SMKR1H3BMG3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.09□□□□□ -2.23
SMKR1H3BMG3 AC009237.7-201ENST00000447357 229 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 NFU1P2-201ENST00000448700 469 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.09□□□□□ -2.23
SMKR1H3BMG3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms