Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU6-944P-201ENST00000364023 107 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 RNU6-842P-201ENST00000384269 107 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 MIR517A-201ENST00000385001 87 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 MIR504-201ENST00000385065 83 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 RNA5SP118-201ENST00000410385 109 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AL445305.1-201ENST00000432577 575 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 HMGB1P18-201ENST00000438801 619 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 RPL39P29-201ENST00000447779 157 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AL121594.1-201ENST00000475906 575 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 RPL30P1-201ENST00000488676 339 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 RNU6-875P-201ENST00000516488 106 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 RNU5B-3P-201ENST00000516601 115 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 RN7SKP256-201ENST00000517201 314 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AC069113.1-201ENST00000517763 267 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AC010928.2-201ENST00000588017 287 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 POLR3GP2-201ENST00000588366 668 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AL109918.3-201ENST00000603072 338 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AP001836.1-201ENST00000604675 523 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AC069294.1-201ENST00000608397 350 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AC009318.2-201ENST00000610917 651 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AC022202.1-201ENST00000613515 211 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AC093913.1-201ENST00000614178 329 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 AC022306.2-201ENST00000617563 647 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 U4atac.1-201ENST00000618345 95 ntBASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 SNORD50.1-201ENST00000362987 71 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 Y_RNA.123-201ENST00000363338 102 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 Y_RNA.404-201ENST00000383978 102 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 Y_RNA.474-201ENST00000384341 102 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 RNU6-1274P-201ENST00000384557 107 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 Y_RNA.529-201ENST00000384586 119 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 MIR521-1-201ENST00000384902 87 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 MIR548K-201ENST00000408406 116 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC097463.2-201ENST00000421074 142 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 MTND4LP11-201ENST00000422184 280 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AL591043.1-201ENST00000432461 424 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 Z82188.1-201ENST00000436709 154 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 RPL9P9-202ENST00000466501 579 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 RPL31P58-201ENST00000469001 379 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC026801.1-201ENST00000497178 464 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC096745.1-201ENST00000509945 370 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 MIR449C-201ENST00000516047 92 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 RNU5F-2P-201ENST00000516066 82 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 RNU6-277P-201ENST00000516272 106 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 CPDP1-201ENST00000579660 283 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC105245.1-201ENST00000581934 244 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC091135.1-201ENST00000585943 307 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC078795.3-201ENST00000602913 472 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC073410.2-201ENST00000603240 332 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 Y_RNA.804-201ENST00000615262 101 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 MIR6128-201ENST00000615528 109 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC063943.3-201ENST00000615562 356 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 MIR7843-201ENST00000622274 79 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 AC091932.3-201ENST00000624223 323 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 TPTEP1-208ENST00000636884 213 ntBASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
TRIM49D1C9J1S8 Y_RNA.58-201ENST00000362807 102 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 RNU6-1285P-201ENST00000363480 105 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 Y_RNA.154-201ENST00000363624 102 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 RNY3P1-201ENST00000365085 102 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 RNY3-201ENST00000365484 102 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 Y_RNA.490-201ENST00000384413 102 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 MIR676-201ENST00000390702 67 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 RNU2-23P-201ENST00000410545 195 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 AC009161.1-201ENST00000417306 376 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 ARL5AP1-201ENST00000418991 388 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 AL353572.1-201ENST00000442490 417 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 MTCO2P3-201ENST00000442543 421 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 RPL7P42-201ENST00000481005 679 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 AF186996.7-201ENST00000492781 209 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 Y_RNA.670-201ENST00000516255 105 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 RNU2-53P-201ENST00000516257 147 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 RNA5SP384-201ENST00000516615 116 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 AC105029.1-201ENST00000520250 669 ntBASIC1.68□□□□□ -2.14
TRIM49D1C9J1S8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms