Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC85CA6NKD9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC85CA6NKD9 SNORD109B-201ENST00000458961 67 ntBASIC3.56□□□□□ -1.84
CCDC85CA6NKD9 SNORD109A-201ENST00000459128 67 ntBASIC3.56□□□□□ -1.84
CCDC85CA6NKD9 AL133393.1-201ENST00000603277 287 ntBASIC3.56□□□□□ -1.84
CCDC85CA6NKD9 AL353997.5-201ENST00000618886 171 ntBASIC3.56□□□□□ -1.84
CCDC85CA6NKD9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC85CA6NKD9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 IPO8P1-201ENST00000455509 3109 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 AC069528.2-201ENST00000624849 1991 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 RNU1-72P-201ENST00000362976 153 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 RNU6-245P-201ENST00000384020 107 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 RNU6-281P-201ENST00000384212 103 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 RNU6-541P-201ENST00000384709 110 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 MIR487A-201ENST00000385009 80 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 U6atac.2-201ENST00000408644 118 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 DPH3P2-201ENST00000422618 250 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 RN7SKP282-201ENST00000516824 299 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 AC131281.1-201ENST00000522984 164 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 HSPE1P20-201ENST00000538133 289 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 EIF4A1P12-201ENST00000551910 141 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 AC125232.2-201ENST00000592457 143 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 ZNF658B-202ENST00000615961 3375 ntBASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC85CA6NKD9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 RNU6-280P-201ENST00000364145 104 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 RNU6-708P-201ENST00000384217 107 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 RNU6-318P-201ENST00000384283 103 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 RNU6-463P-201ENST00000384340 107 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 MIR208B-201ENST00000401172 77 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 SNORA3.2-201ENST00000408221 125 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 MTATP8P1-201ENST00000467115 207 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 RN7SL330P-201ENST00000469709 307 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 MRPS35P2-201ENST00000508242 191 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 AC067942.3-201ENST00000512025 362 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 RNU6-1012P-201ENST00000516606 109 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 MIR7515-201ENST00000637837 67 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 FAM35DP-201ENST00000323387 2712 ntBASIC3.54□□□□□ -1.84
CCDC85CA6NKD9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 Y_RNA.149-201ENST00000363558 117 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 Y_RNA.355-201ENST00000365462 98 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 SNORA18.3-201ENST00000384122 132 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 RNU6-611P-201ENST00000384276 104 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 RNU6-378P-201ENST00000384324 107 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 RNU6-1109P-201ENST00000391187 107 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 RPL21P1-201ENST00000399532 476 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 AC126124.2-201ENST00000413542 321 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 AC087499.2-201ENST00000432861 149 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 AC112220.1-201ENST00000434628 355 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 RPL21P2-201ENST00000440049 481 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 RPEP5-201ENST00000441137 268 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 AC080013.2-201ENST00000460866 323 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 AC010469.2-201ENST00000496412 480 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 RN7SKP49-201ENST00000516675 260 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 AC022868.1-201ENST00000517767 391 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 AC026470.2-201ENST00000561492 181 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 U6.92-201ENST00000636464 89 ntBASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC85CA6NKD9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.53□□□□□ -1.85
CCDC85CA6NKD9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 Y_RNA.574-201ENST00000384766 95 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 MIR29B2-201ENST00000385055 81 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 SNORA46.1-201ENST00000391069 153 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 SNORD78.2-201ENST00000391076 69 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 HMGN2P8-201ENST00000391458 268 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 RPL36AP21-201ENST00000490372 323 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 AC145146.1-201ENST00000496370 254 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 CKS1BP2-201ENST00000497342 240 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 SNORA25.11-201ENST00000515935 105 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 Y_RNA.713-201ENST00000517013 96 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 SCARNA3-201ENST00000517097 143 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 IGKV3-31-201ENST00000523109 329 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 UBL5P4-201ENST00000562584 236 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 RPL30P11-203ENST00000598995 310 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 RAC1P9-201ENST00000604990 392 ntBASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC85CA6NKD9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 Y_RNA.176-201ENST00000363815 109 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 U3.9-201ENST00000363823 204 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 Y_RNA.458-201ENST00000384240 102 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 SNORD15B-201ENST00000384714 146 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 MIR568-201ENST00000385036 95 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 RNU6-1093P-201ENST00000391194 107 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 MRPL35P1-201ENST00000404272 572 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms