Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 AC069294.1-201ENST00000608397 350 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 AC069528.2-201ENST00000624849 1991 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 Y_RNA.106-201ENST00000363189 100 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 Y_RNA.158-201ENST00000363651 101 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 MIR29B2-201ENST00000385055 81 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 RNA5SP213-201ENST00000391031 106 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 RNU1-139P-201ENST00000391307 165 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 MRPL42P3-201ENST00000401492 326 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 AL513477.1-202ENST00000417061 214 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 RPL21P2-201ENST00000440049 481 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 AC073901.1-201ENST00000462471 408 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 SNORA40.14-201ENST00000516543 86 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 RNA5SP54-201ENST00000516951 92 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 AC090617.3-201ENST00000573670 475 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 AL713866.2-201ENST00000603579 219 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 AL138963.2-201ENST00000605137 226 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 SNORD58B-201ENST00000607313 66 ntBASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.55□□□□□ -2
TCRBV7S3A2A0A539 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 RNU6-378P-201ENST00000384324 107 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 MIR218-1-201ENST00000384999 110 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AC112492.4-201ENST00000456549 352 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AC091179.1-201ENST00000461606 579 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AC145146.1-201ENST00000496370 254 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 SLC25A15P5-201ENST00000508033 253 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AC023141.11-201ENST00000508864 202 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 RNU6-58P-201ENST00000517143 103 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 EIF4A1P12-201ENST00000551910 141 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AC006504.6-201ENST00000590142 199 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 VN1R91P-201ENST00000594377 169 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AC040896.1-201ENST00000613819 479 ntBASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.54□□□□□ -2
TCRBV7S3A2A0A539 AC005592.1-201ENST00000566527 1640 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 MIR21-201ENST00000362134 72 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 snoU2_19.1-201ENST00000362361 80 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 Y_RNA.319-201ENST00000365138 92 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 Y_RNA.333-201ENST00000365274 102 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 RNU6-639P-201ENST00000384074 107 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 MIR95-201ENST00000385072 81 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 RNU6-159P-201ENST00000391080 106 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 MIR208B-201ENST00000401172 77 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 Y_RNA.605-201ENST00000410577 105 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 EEF1B2P7-201ENST00000451177 676 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 AC140059.1-201ENST00000489238 361 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 RNU6-1114P-201ENST00000516022 107 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 AC091144.1-201ENST00000519573 138 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 GTF3AP2-201ENST00000557014 266 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 U2.1-201ENST00000618978 145 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 MTND5P16-201ENST00000460269 1703 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 BX322639.1-202ENST00000423987 2213 ntBASIC2.53□□□□□ -2
TCRBV7S3A2A0A539 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 RNU6-859P-201ENST00000362728 107 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 U3.9-201ENST00000363823 204 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 RNY3P11-201ENST00000364153 102 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 Y_RNA.358-201ENST00000365491 99 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 SET-203ENST00000372688 801 ntTSL 2 BASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 SNORA9-201ENST00000384215 133 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 RNU6-1160P-201ENST00000384546 104 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 Y_RNA.557-201ENST00000384680 107 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 MIR491-201ENST00000384877 84 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 MIR627-201ENST00000384979 97 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 MIR487A-201ENST00000385009 80 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 SNORA46.1-201ENST00000391069 153 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 RNU6-1093P-201ENST00000391194 107 ntBASIC2.52□□□□□ -2.01
TCRBV7S3A2A0A539 HMGB3P2-201ENST00000411913 584 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms