Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 RNU6-609P-201ENST00000365459 107 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 RNY1P8-201ENST00000383970 114 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 SNORD116-13-201ENST00000384408 92 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 SNORA16.2-201ENST00000390991 127 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 MIR1284-201ENST00000408337 120 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 HIGD1AP15-201ENST00000416198 280 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 AC002486.1-201ENST00000435098 391 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 NFU1P2-201ENST00000448700 469 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 AC022493.2-201ENST00000506122 481 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 SNORA70.12-201ENST00000516084 153 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 AC025627.3-201ENST00000582078 182 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 AL356157.2-201ENST00000605122 111 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 U6.42-201ENST00000618440 107 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 AC136475.10-201ENST00000620253 385 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 AC006927.4-201ENST00000639187 543 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 BX322639.1-202ENST00000423987 2213 ntBASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 SNORA12.1-201ENST00000390873 148 ntBASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 U7.7-201ENST00000459276 60 ntBASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 AC106038.2-201ENST00000520706 568 ntBASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 Z98751.3-201ENST00000604447 521 ntBASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 PCGEM1.1-201ENST00000613431 131 ntBASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 AC106754.2-201ENST00000623006 233 ntBASIC0.07□□□□□ -2.4
TRAV17A0A0B4J275 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 AC092104.1-201ENST00000497346 1441 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 RNA5SP62-201ENST00000363457 110 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 MIR578-201ENST00000384828 96 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 RNA5SP109-201ENST00000391010 116 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 MIR320C1-201ENST00000408566 88 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 AC244098.3-201ENST00000424803 96 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 AC000111.3-201ENST00000433478 193 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 AL606517.2-201ENST00000442855 241 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 AL049829.1-201ENST00000465411 156 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 RNU6-947P-201ENST00000516264 106 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 RNU4-77P-201ENST00000516692 156 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 MIR4431-201ENST00000579990 94 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 MIR5190-201ENST00000581537 80 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 AC099785.1-201ENST00000605697 437 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 AC100810.6-201ENST00000638068 285 ntBASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV17A0A0B4J275 Y_RNA.68-201ENST00000362881 102 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 RNU6-877P-201ENST00000383868 107 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 RNU4-22P-201ENST00000411058 166 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 VPS26BP1-201ENST00000417155 755 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 AC010154.1-201ENST00000425857 269 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 MTND5P2-201ENST00000442927 1142 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 AP000797.1-201ENST00000478870 387 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 RNU1-86P-201ENST00000516108 154 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 RNU1-107P-201ENST00000516617 154 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 MTND2P7-201ENST00000521337 640 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 AC007834.2-201ENST00000536310 343 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 ZNF321P-202ENST00000550843 495 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 MIR548AC-201ENST00000585049 88 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 RPL17P51-201ENST00000605218 238 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 AP002802.2-201ENST00000605877 235 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 AL513423.1-201ENST00000621695 132 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 FRG1KP-201ENST00000623592 341 ntBASIC0.05□□□□□ -2.4
TRAV17A0A0B4J275 U3.9-201ENST00000363823 204 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 Y_RNA.192-201ENST00000363977 102 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 Y_RNA.412-201ENST00000384001 104 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 SNORA40.2-201ENST00000390847 128 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 SNORA26.3-201ENST00000391119 136 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 RPS20P2-201ENST00000402520 389 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 AL355994.1-201ENST00000424379 260 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 AC243964.1-201ENST00000441814 261 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 AL360271.2-201ENST00000447710 161 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 AC109445.1-201ENST00000512356 383 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 RNU2-34P-201ENST00000516534 121 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 RNU5F-4P-201ENST00000516581 114 ntBASIC0.04□□□□□ -2.4
TRAV17A0A0B4J275 AC024995.1-201ENST00000523014 93 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms