Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 SCGB1D5P-201ENST00000515134 247 ntBASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 RNU6-1012P-201ENST00000516606 109 ntBASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 RNA5SP54-201ENST00000516951 92 ntBASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 Y_RNA.713-201ENST00000517013 96 ntBASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 AC079598.5-201ENST00000547460 117 ntBASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 AC110588.1-201ENST00000559699 137 ntBASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 MIR3923-201ENST00000579521 83 ntBASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 AC078899.3-201ENST00000599065 212 ntBASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 AL034555.1-201ENST00000604816 211 ntBASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 AC240442.1-201ENST00000616055 283 ntBASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 UCA1.1-201ENST00000620952 75 ntBASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
TRBV5-3A0A0A0MS03 AC000403.1-201ENST00000613696 3585 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 OR56A5-201ENST00000340110 738 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 CD24P4-201ENST00000382840 243 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 Y_RNA.396-201ENST00000383949 103 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 RNU6-281P-201ENST00000384212 103 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 Y_RNA.461-201ENST00000384263 103 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 RNU1-57P-201ENST00000384491 166 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 RNU6-1093P-201ENST00000391194 107 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 MIR208B-201ENST00000401172 77 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 MIR1302-6-201ENST00000408466 90 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 Z98742.2-201ENST00000431564 187 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 LINC01399-202ENST00000458450 244 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 SNORA31.6-201ENST00000516241 130 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 SNORA74D-201ENST00000516404 141 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 AC093023.1-201ENST00000547375 507 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 MIR4659A-201ENST00000580269 81 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 Y_RNA.772-201ENST00000606692 102 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 AC012314.7-201ENST00000619693 93 ntBASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRBV5-3A0A0A0MS03 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 RNA5SP361-201ENST00000362686 118 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 RNU6-655P-201ENST00000362858 107 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 SNORA25.6-201ENST00000364121 118 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 RNU6-280P-201ENST00000364145 104 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 RNA5SP139-201ENST00000364340 117 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 RNU6-926P-201ENST00000384075 107 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 CBX3P9-201ENST00000402326 552 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 AL031121.1-201ENST00000406553 254 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 RPS27AP9-201ENST00000477681 438 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 RAC1P5-201ENST00000512182 576 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 Y_RNA.668-201ENST00000516233 93 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 AP003733.2-201ENST00000529409 171 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 AL020997.2-201ENST00000602607 184 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 AC011476.5-201ENST00000615594 130 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 AC002064.3-201ENST00000623448 346 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 AL359854.1-201ENST00000614203 1594 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 AC007336.1-201ENST00000576365 3828 ntBASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.56□□□□□ -2
TRBV5-3A0A0A0MS03 Y_RNA.105-201ENST00000363182 111 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 Y_RNA.143-201ENST00000363520 106 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 RNU6-1210P-201ENST00000363775 107 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 Y_RNA.376-201ENST00000365638 108 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 U8.9-201ENST00000365667 134 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 RNU6-472P-201ENST00000384299 107 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 AL079342.1-201ENST00000401460 267 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 SNORD12B-201ENST00000410433 91 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 RNU6-121P-201ENST00000410525 99 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 RNU6-1001P-201ENST00000411265 100 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 ZNF204P-201ENST00000416749 2397 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 AC097463.2-201ENST00000421074 142 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 AC007215.1-201ENST00000464893 276 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 AL121594.1-201ENST00000475906 575 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 MRPS36P2-201ENST00000512569 299 ntBASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.55□□□□□ -2
TRBV5-3A0A0A0MS03 RN7SKP49-201ENST00000516675 260 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms