Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RNU2-3P-201ENST00000410144 191 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 RPEP5-201ENST00000441137 268 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 SNORA31.10-201ENST00000516482 106 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 RNU6-405P-201ENST00000516637 110 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 RNU6-467P-201ENST00000517027 110 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 TMF1P1-201ENST00000576058 373 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 MIR5692A1-201ENST00000580523 69 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 MIR3118-1-201ENST00000581787 76 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 AC121334.2-201ENST00000605387 271 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 AC243829.6-201ENST00000612652 106 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 RNY4P24-201ENST00000362735 96 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 SNORD56.2-201ENST00000363242 71 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 RNU6-16P-201ENST00000384385 107 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 SNORA24.1-201ENST00000384401 135 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 SNORD41-201ENST00000386967 70 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 TIMM9P3-201ENST00000428659 274 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 AC092423.1-201ENST00000430165 186 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 HSFY7P-201ENST00000432672 318 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 HMGN2P34-201ENST00000437647 269 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 HSFY8P-201ENST00000437934 318 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 GAPDHP17-201ENST00000449858 1001 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 MTND1P12-201ENST00000455231 147 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 AL162395.1-201ENST00000457882 422 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 RNU6-377P-201ENST00000515965 102 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 RNU6-496P-201ENST00000516145 99 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 Y_RNA.676-201ENST00000516393 96 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 RNU6-201P-201ENST00000517100 61 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 AC022616.6-201ENST00000520479 119 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 MTATP6P15-201ENST00000527233 835 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 AL139022.2-201ENST00000606934 443 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 PART1_2.1-201ENST00000612397 250 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 AP000943.4-201ENST00000622912 357 ntBASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
TRAV27A0A087WT01 RNU6-336P-201ENST00000364891 107 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 RNU6-950P-201ENST00000384651 107 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 SNORA26.3-201ENST00000391119 136 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 AC078809.1-201ENST00000427601 140 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 AL133217.1-201ENST00000450980 425 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 RNU7-21P-201ENST00000459430 62 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 AC113410.1-201ENST00000505029 247 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 RNA5SP337-201ENST00000517007 109 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 RNU6-1003P-201ENST00000517099 105 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 AC008521.1-201ENST00000587471 187 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 RNU6-1192P-201ENST00000612197 107 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 RNU6-489P-201ENST00000618289 107 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 AC027514.1-201ENST00000588561 1603 ntBASIC0.24□□□□□ -2.37
TRAV27A0A087WT01 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-37P-201ENST00000362692 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-552P-201ENST00000362869 119 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-428P-201ENST00000362942 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 U3.4-201ENST00000363352 213 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-11P-201ENST00000364234 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 SNORD32A-201ENST00000364805 84 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-25P-201ENST00000383873 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-1-201ENST00000383898 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-48P-201ENST00000384161 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-36P-201ENST00000384172 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-4P-201ENST00000384205 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-5P-201ENST00000384238 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-3P-201ENST00000384314 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-39P-201ENST00000384344 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-15P-201ENST00000384534 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-2-201ENST00000384627 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-29P-201ENST00000384637 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-417P-201ENST00000384712 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-9-201ENST00000384776 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-33P-201ENST00000384793 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNA5SP323-201ENST00000391094 133 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 SNORA75.2-201ENST00000391138 150 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 SNORA75.3-201ENST00000391231 150 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 AL355796.1-201ENST00000406706 323 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-607P-201ENST00000411283 108 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 AC016717.1-201ENST00000448918 286 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-1132P-201ENST00000459214 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 AC104982.1-201ENST00000478775 574 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 SNORA19.3-201ENST00000516165 130 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 MIR4711-201ENST00000578274 70 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms