Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC114801.2-201ENST00000503825 781 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 AC090897.2-201ENST00000581715 130 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 MIR3171-201ENST00000584270 74 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.56□□□□□ -2
SNX9Q9Y5X1 AC103810.6-201ENST00000606708 136 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 AC024581.2-201ENST00000619986 252 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 SNORA43.4-201ENST00000629559 138 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 MTND4P27-201ENST00000450813 1354 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.56□□□□□ -2
SNX9Q9Y5X1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.56□□□□□ -2
SNX9Q9Y5X1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.56□□□□□ -2
SNX9Q9Y5X1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 Y_RNA.216-201ENST00000364205 93 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SNX9Q9Y5X1 Y_RNA.496-201ENST00000384444 101 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 MIR544A-201ENST00000384855 91 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 AL133475.1-201ENST00000404414 305 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 RNA5SP508-201ENST00000411327 119 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 AC007064.1-201ENST00000412238 351 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.55□□□□□ -2
SNX9Q9Y5X1 MICF-203ENST00000432679 129 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.55□□□□□ -2
SNX9Q9Y5X1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.55□□□□□ -2
SNX9Q9Y5X1 Y_RNA.631-201ENST00000459607 101 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 AC022493.2-201ENST00000506122 481 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 AC008413.1-201ENST00000511864 177 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 SNORA31.6-201ENST00000516241 130 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 RNA5SP24-201ENST00000516478 95 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 Y_RNA.711-201ENST00000516993 102 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.55□□□□□ -2
SNX9Q9Y5X1 MYL12BP1-201ENST00000569826 507 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 MIR5701-3-201ENST00000578890 82 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 MIR4273-201ENST00000582824 84 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 AC005899.2-201ENST00000584353 90 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 MIR5701-1-201ENST00000585138 82 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
SNX9Q9Y5X1 RNU6-91P-201ENST00000607774 107 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 AC133104.2-201ENST00000615272 193 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 MIR5701-2-201ENST00000615634 82 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 HMGB1P24-202ENST00000615653 685 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 AL159153.1-201ENST00000619688 317 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.55□□□□□ -2
SNX9Q9Y5X1 MIR7157-201ENST00000635801 60 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 AL450472.1-202ENST00000637286 180 ntBASIC2.55□□□□□ -2
SNX9Q9Y5X1 MTND5P9-201ENST00000503854 1755 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNX9Q9Y5X1 Y_RNA.123-201ENST00000363338 102 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 RNU6-595P-201ENST00000363944 107 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 SNORA38-201ENST00000363946 132 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 SNORD114-30-201ENST00000364448 72 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 RNA5SP126-201ENST00000365092 109 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 MIR548P-201ENST00000408336 84 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.54□□□□□ -2
SNX9Q9Y5X1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.54□□□□□ -2
SNX9Q9Y5X1 AC107222.1-201ENST00000510899 637 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.54□□□□□ -2
SNX9Q9Y5X1 SMURF2P1-201ENST00000514992 481 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 SCARNA15.1-201ENST00000516384 125 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 RNU6-699P-201ENST00000517081 110 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 AP003072.1-201ENST00000531740 145 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 MRPS36P4-201ENST00000534436 298 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 SNRPGP18-201ENST00000553000 214 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 SUB1P3-201ENST00000564581 315 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.54□□□□□ -2
SNX9Q9Y5X1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.54□□□□□ -2
SNX9Q9Y5X1 AL356157.2-201ENST00000605122 111 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
SNX9Q9Y5X1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.54□□□□□ -2
SNX9Q9Y5X1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SNX9Q9Y5X1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.54□□□□□ -2
SNX9Q9Y5X1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.54□□□□□ -2
SNX9Q9Y5X1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.53□□□□□ -2
SNX9Q9Y5X1 AC016717.2-201ENST00000609089 5141 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 Z82209.1-201ENST00000422141 2135 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SNX9Q9Y5X1 RNU6-490P-201ENST00000362985 107 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 RNU6-529P-201ENST00000363383 104 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 Y_RNA.252-201ENST00000364556 101 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.53□□□□□ -2
SNX9Q9Y5X1 RNU6-308P-201ENST00000390957 107 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.53□□□□□ -2
SNX9Q9Y5X1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.53□□□□□ -2
SNX9Q9Y5X1 AC068781.1-201ENST00000488231 618 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 AC023141.11-201ENST00000508864 202 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.53□□□□□ -2
SNX9Q9Y5X1 RNU6-976P-201ENST00000516086 111 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 IGLV3-17-201ENST00000519099 244 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.53□□□□□ -2
SNX9Q9Y5X1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.53□□□□□ -2
SNX9Q9Y5X1 RPS15AP11-201ENST00000594193 385 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 AC067747.1-201ENST00000608026 250 ntBASIC2.53□□□□□ -2
SNX9Q9Y5X1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.53□□□□□ -2
SNX9Q9Y5X1 SNORA67.1-201ENST00000364749 141 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 BTF3L4P2-201ENST00000392798 346 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 RNU4-53P-201ENST00000410828 140 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms