Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AL162730.1-201ENST00000605734 292 ntBASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 MIR7515-201ENST00000637837 67 ntBASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 MTND5P16-201ENST00000460269 1703 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 SNORA9.2-201ENST00000365361 133 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 Y_RNA.527-201ENST00000384573 102 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 Y_RNA.557-201ENST00000384680 107 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 MIR512-1-201ENST00000384913 84 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-823P-201ENST00000391042 103 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 RNU1-139P-201ENST00000391307 165 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 RNA5SP201-201ENST00000410316 124 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-1328P-201ENST00000410938 106 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 snoU13.6-201ENST00000458785 104 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 RNU7-87P-201ENST00000459343 62 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 AC007215.1-201ENST00000464893 276 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 RPL27AP5-201ENST00000469428 449 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 RNA5SP54-201ENST00000516951 92 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-58P-201ENST00000517143 103 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 AC027176.1-201ENST00000560204 514 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 MIR3200-201ENST00000580767 85 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 YPEL5P2-201ENST00000605553 359 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 MIR7157-201ENST00000635801 60 ntBASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PCDHA3Q9Y5H8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 ZNF72P-201ENST00000425869 1908 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AC000403.1-201ENST00000613696 3585 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 RNU4-15P-201ENST00000362613 141 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 Y_RNA.319-201ENST00000365138 92 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 Y_RNA.380-201ENST00000365663 111 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 Y_RNA.389-201ENST00000383924 113 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-541P-201ENST00000384709 110 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 MIR628-201ENST00000385229 95 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 RNA5SP213-201ENST00000391031 106 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 MIR887-201ENST00000401258 79 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-101P-201ENST00000410323 104 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 USP9YP16-201ENST00000430287 407 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 USP9YP23-201ENST00000455085 407 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 HMGN1P10-201ENST00000474557 553 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AC007536.1-201ENST00000533382 349 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AC107016.2-201ENST00000547968 190 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AL442163.3-201ENST00000554110 156 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AC113195.1-201ENST00000579952 141 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AC010620.2-201ENST00000600135 313 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 AC026241.1-201ENST00000517873 2142 ntBASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHA3Q9Y5H8 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 Y_RNA.459-201ENST00000384251 102 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-159P-201ENST00000391080 106 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 SNORA26.7-201ENST00000391288 122 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 RPL21P75-201ENST00000396599 483 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 RPL21P28-201ENST00000401418 483 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 U6atac.2-201ENST00000408644 118 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AL590556.1-201ENST00000423231 483 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 EIF1P2-201ENST00000428233 350 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 RPL21P2-201ENST00000440049 481 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 RPL21P39-201ENST00000463605 483 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AP000870.1-201ENST00000472927 406 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AC103975.1-201ENST00000482506 483 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AC087190.1-201ENST00000484462 480 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AC107032.1-201ENST00000485945 480 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AC132942.1-201ENST00000486753 483 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AC093591.1-201ENST00000491435 481 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 RPL21P16-201ENST00000495531 483 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 SNORA25.11-201ENST00000515935 105 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 RNU6-1114P-201ENST00000516022 107 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AC040926.1-201ENST00000530195 238 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AP002770.2-201ENST00000543613 532 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AC124312.5-201ENST00000604451 268 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 PCGEM1.1-201ENST00000613431 131 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 MIR8057-201ENST00000620957 69 ntBASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3□□□□□ -1.93
PCDHA3Q9Y5H8 AC096644.4-201ENST00000563417 2912 ntBASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 Y_RNA.27-201ENST00000362540 103 ntBASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 SNORA63.7-201ENST00000365579 123 ntBASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 U8.9-201ENST00000365667 134 ntBASIC2.99□□□□□ -1.93
PCDHA3Q9Y5H8 SNORD21-201ENST00000383953 95 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms