Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MTND3P3-201ENST00000505004 126 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 RN7SKP179-201ENST00000516126 217 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 RNU7-40P-201ENST00000516397 64 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AC016256.1-201ENST00000547971 354 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AL512310.8-201ENST00000550183 120 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 MIR4524B-201ENST00000581569 115 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AL022161.1-201ENST00000604390 213 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AP001836.1-201ENST00000604675 523 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AC008147.4-201ENST00000617570 1204 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AC136475.10-201ENST00000620253 385 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 RNU6-562P-201ENST00000362731 107 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 RNU1-22P-201ENST00000363334 158 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 RNU6-1303P-201ENST00000364841 107 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 RNU6-74P-201ENST00000384235 107 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 MIR208B-201ENST00000401172 77 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 USP9YP28-201ENST00000435142 589 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 AC022364.2-201ENST00000457963 554 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 RPS26P45-201ENST00000471748 340 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 RSL24D1P11-201ENST00000591045 491 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 AC006566.1-201ENST00000608943 513 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 AL450472.1-202ENST00000637286 180 ntBASIC1.05□□□□□ -2.24
RHBDD3Q9Y3P4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 RNU6-877P-201ENST00000383868 107 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 Y_RNA.504-201ENST00000384481 104 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AP000275.1-201ENST00000411943 390 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 CDK8P2-201ENST00000415020 547 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AP1B1P2-201ENST00000416196 106 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 BTF3P4-201ENST00000418852 495 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AC012306.1-201ENST00000423267 114 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AL031274.1-201ENST00000450334 232 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AL162395.1-201ENST00000457882 422 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AC011406.1-201ENST00000512440 370 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 RNU2-69P-201ENST00000516061 100 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 SNORA25.17-201ENST00000517184 124 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 MTCO3P23-201ENST00000561363 289 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 MIR4709-201ENST00000577272 72 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 AC073413.2-201ENST00000604332 360 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 CTHRC1P1-201ENST00000605383 469 ntBASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
RHBDD3Q9Y3P4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 RNU4-48P-201ENST00000365559 182 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 RNU6-968P-201ENST00000384076 107 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 RNU6-1029P-201ENST00000384109 107 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 MTND3P17-201ENST00000416968 344 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 SNORD116-28-201ENST00000516123 91 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 RNA5SP404-201ENST00000517118 132 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 AC023043.2-201ENST00000589678 1026 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 NIFKP6-201ENST00000598115 845 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 MZT1P2-201ENST00000604387 248 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 AC092354.1-201ENST00000606057 376 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 AC040896.1-201ENST00000613819 479 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 AC012676.2-201ENST00000619258 186 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 AC009033.1-201ENST00000624279 431 ntBASIC1.03□□□□□ -2.24
RHBDD3Q9Y3P4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 MIR378A-201ENST00000362177 66 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 RNU1-124P-201ENST00000363861 145 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 RNY4P34-201ENST00000364779 95 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-534P-201ENST00000364877 106 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-827P-201ENST00000365553 106 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-950P-201ENST00000384651 107 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 MIR513A1-201ENST00000385138 129 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-482P-201ENST00000391068 107 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 BX322639.1-202ENST00000423987 2213 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms