Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RNU6-710P-201ENST00000410424 105 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 TOMM22P2-201ENST00000430735 237 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 CR769767.1-201ENST00000436337 346 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 AC146507.2-201ENST00000460608 476 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 AL133162.1-201ENST00000463228 453 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 AC104619.4-201ENST00000510773 249 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 RN7SKP164-201ENST00000516138 266 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 RNU6-479P-201ENST00000516348 105 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.3□□□□□ -1.72
NOD1Q9Y239 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.3□□□□□ -1.72
NOD1Q9Y239 MIR3684-201ENST00000579779 74 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 AL391813.1-201ENST00000603098 260 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 AC096577.2-201ENST00000611455 153 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 AL591424.2-201ENST00000617023 128 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 AC091953.5-201ENST00000622919 233 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
NOD1Q9Y239 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NOD1Q9Y239 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NOD1Q9Y239 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
NOD1Q9Y239 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NOD1Q9Y239 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NOD1Q9Y239 Y_RNA.243-201ENST00000364481 109 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 RNU6-818P-201ENST00000364837 108 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 Y_RNA.293-201ENST00000364908 93 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 RNU6-239P-201ENST00000390990 99 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 EBAG9P1-201ENST00000418955 543 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 AC112771.1-201ENST00000463581 102 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 RN7SKP18-201ENST00000516005 275 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 RNU6-426P-201ENST00000516464 97 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 RNA5SP164-201ENST00000516533 110 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 SNORA70.24-201ENST00000517233 118 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 HSPE1P18-201ENST00000517602 280 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 IGLV3-26-201ENST00000520756 302 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.29□□□□□ -1.72
NOD1Q9Y239 AC025281.1-201ENST00000567026 265 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 AC069294.1-201ENST00000608397 350 ntBASIC4.29□□□□□ -1.72
NOD1Q9Y239 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
NOD1Q9Y239 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NOD1Q9Y239 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
NOD1Q9Y239 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
NOD1Q9Y239 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NOD1Q9Y239 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NOD1Q9Y239 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.28□□□□□ -1.72
NOD1Q9Y239 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.28□□□□□ -1.72
NOD1Q9Y239 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.28□□□□□ -1.72
NOD1Q9Y239 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NOD1Q9Y239 snoU2_19.1-201ENST00000362361 80 ntBASIC4.28□□□□□ -1.72
NOD1Q9Y239 RNU6-1048P-201ENST00000364054 107 ntBASIC4.28□□□□□ -1.72
NOD1Q9Y239 RNU4-10P-201ENST00000364383 140 ntBASIC4.28□□□□□ -1.72
NOD1Q9Y239 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NOD1Q9Y239 RNU6-1027P-201ENST00000383998 107 ntBASIC4.28□□□□□ -1.72
NOD1Q9Y239 SNORA72.4-201ENST00000384174 132 ntBASIC4.28□□□□□ -1.72
NOD1Q9Y239 RNU6-1154P-201ENST00000391001 104 ntBASIC4.28□□□□□ -1.72
NOD1Q9Y239 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NOD1Q9Y239 SNORA3C-201ENST00000408792 125 ntBASIC4.28□□□□□ -1.72
NOD1Q9Y239 RNA5SP38-201ENST00000410750 119 ntBASIC4.28□□□□□ -1.72
NOD1Q9Y239 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
NOD1Q9Y239 RNU6-313P-201ENST00000516317 112 ntBASIC4.28□□□□□ -1.72
NOD1Q9Y239 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.28□□□□□ -1.72
NOD1Q9Y239 MIR4744-201ENST00000581563 82 ntBASIC4.28□□□□□ -1.72
NOD1Q9Y239 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
NOD1Q9Y239 AC068700.1-201ENST00000565862 3754 ntBASIC4.28□□□□□ -1.72
NOD1Q9Y239 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NOD1Q9Y239 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.27□□□□□ -1.73
NOD1Q9Y239 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NOD1Q9Y239 AC069528.2-201ENST00000624849 1991 ntBASIC4.27□□□□□ -1.73
NOD1Q9Y239 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NOD1Q9Y239 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NOD1Q9Y239 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NOD1Q9Y239 RNU6-1290P-201ENST00000362957 109 ntBASIC4.27□□□□□ -1.73
NOD1Q9Y239 RNU6-103P-201ENST00000363686 107 ntBASIC4.27□□□□□ -1.73
NOD1Q9Y239 RNU1-57P-201ENST00000384491 166 ntBASIC4.27□□□□□ -1.73
NOD1Q9Y239 SNORA8.3-201ENST00000384679 139 ntBASIC4.27□□□□□ -1.73
NOD1Q9Y239 MIR491-201ENST00000384877 84 ntBASIC4.27□□□□□ -1.73
NOD1Q9Y239 Y_RNA.586-201ENST00000391146 98 ntBASIC4.27□□□□□ -1.73
NOD1Q9Y239 Z75741.1-201ENST00000446793 314 ntBASIC4.27□□□□□ -1.73
NOD1Q9Y239 SCARNA14-201ENST00000516903 136 ntBASIC4.27□□□□□ -1.73
NOD1Q9Y239 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.27□□□□□ -1.73
NOD1Q9Y239 RNU1-30P-201ENST00000606575 163 ntBASIC4.27□□□□□ -1.73
NOD1Q9Y239 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.27□□□□□ -1.73
NOD1Q9Y239 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NOD1Q9Y239 AC010680.1-201ENST00000590024 3590 ntBASIC4.27□□□□□ -1.73
NOD1Q9Y239 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NOD1Q9Y239 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NOD1Q9Y239 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NOD1Q9Y239 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NOD1Q9Y239 snoU2_19.4-201ENST00000364329 80 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 SNORA67.2-201ENST00000384300 149 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 MIR218-2-201ENST00000385006 110 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 RNU6-578P-201ENST00000390980 103 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 HDGFP1-201ENST00000405943 252 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 RPL23AP48-201ENST00000406913 488 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 RNU6-855P-201ENST00000410395 104 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 AL365496.1-201ENST00000426885 215 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 RNA5SP272-201ENST00000516095 111 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 AC026241.1-201ENST00000517873 2142 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 MIR4431-201ENST00000579990 94 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 AC090616.3-201ENST00000582184 217 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 MIR5187-201ENST00000583479 76 ntBASIC4.26□□□□□ -1.73
NOD1Q9Y239 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms