Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU6-392P-201ENST00000364926 101 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 SNORA29-201ENST00000384183 140 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 RNU6-74P-201ENST00000384235 107 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 RNU6-1065P-201ENST00000384513 106 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 SNX2P2-201ENST00000424553 323 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 USP9YP14-201ENST00000430663 563 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 MTCO3P29-201ENST00000432119 779 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AC073614.1-201ENST00000438690 650 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 UBE2D3P4-201ENST00000441973 436 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 HMGN1P7-201ENST00000491722 313 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AC005840.1-201ENST00000498412 377 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AC091435.1-201ENST00000505442 584 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 MTATP6P9-201ENST00000515039 680 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 RNU7-40P-201ENST00000516397 64 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 RNA5SP384-201ENST00000516615 116 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 Vault.3-201ENST00000516676 95 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AC103996.1-201ENST00000555468 102 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 CYP4A27P-201ENST00000567218 190 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AC090517.1-201ENST00000569307 266 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AP005136.1-201ENST00000579765 429 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AL356157.2-201ENST00000605122 111 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AC016727.1-205ENST00000605437 569 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 SNORA43.4-201ENST00000629559 138 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 RNU6-545P-201ENST00000362681 104 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 RNU6-53P-201ENST00000365367 106 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 RNU6-418P-201ENST00000384035 107 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 RNU6-1026P-201ENST00000384465 108 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 Y_RNA.504-201ENST00000384481 104 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 Y_RNA.598-201ENST00000410480 95 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AL593851.1-201ENST00000426171 157 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC132479.1-201ENST00000449160 144 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC114982.1-201ENST00000469402 321 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 RPS23P5-201ENST00000495419 428 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC016632.1-201ENST00000503994 196 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 UBL5P1-201ENST00000507979 193 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC011406.1-201ENST00000512440 370 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 RNU6-1053P-201ENST00000515930 101 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 SNORA25.17-201ENST00000517184 124 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 MRPS36P3-201ENST00000519284 130 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AP003461.1-201ENST00000528866 78 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 MIR4742-201ENST00000581069 85 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 MIR3124-201ENST00000582636 67 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC091805.2-201ENST00000603848 235 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AL022161.1-201ENST00000604390 213 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC064872.1-201ENST00000604823 1072 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC080078.3-201ENST00000605407 463 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC005520.5-201ENST00000613926 164 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 MIR8065-201ENST00000620577 100 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 AC027335.2-201ENST00000624030 375 ntBASIC0.69□□□□□ -2.3
HHLA3Q9XRX5 MIR337-201ENST00000362281 93 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 Y_RNA.132-201ENST00000363421 102 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 SNORA33-201ENST00000363664 130 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 RNU6-827P-201ENST00000365553 106 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 MIR208B-201ENST00000401172 77 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 RNU6-195P-201ENST00000411352 109 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 HSFY7P-201ENST00000432672 318 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 AL596276.1-201ENST00000434465 418 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 USP9YP28-201ENST00000435142 589 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 HSFY8P-201ENST00000437934 318 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 AL603825.1-201ENST00000438481 80 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 PRPS1P1-201ENST00000445305 876 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 AL031274.1-201ENST00000450334 232 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 C1DP4-201ENST00000455429 424 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 RPS23P4-201ENST00000487908 423 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 AC008628.2-201ENST00000502605 298 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 MTND3P3-201ENST00000505004 126 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 AC067942.3-201ENST00000512025 362 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 LRRC34P2-201ENST00000514850 553 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 FABP5P5-201ENST00000515537 406 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 RN7SKP88-201ENST00000516847 250 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 RNU6-410P-201ENST00000517006 107 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 DEFB131C-201ENST00000528817 165 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 MIR3664-201ENST00000579074 99 ntBASIC0.68□□□□□ -2.3
HHLA3Q9XRX5 MIR548AB-201ENST00000584917 84 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms