Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC008628.2-201ENST00000502605 298 ntBASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 ATP5EP1-201ENST00000510257 156 ntBASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 SNORA14.1-201ENST00000516113 141 ntBASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 MIR3169-201ENST00000578032 83 ntBASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 MIR4424-201ENST00000585257 86 ntBASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 AC103810.8-201ENST00000607347 118 ntBASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 AL450472.1-202ENST00000637286 180 ntBASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.59□□□□□ -2.15
NPIPA1Q9UND3 AC233981.2-201ENST00000611524 1614 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 AC009541.1-201ENST00000438279 2662 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 RNU4-66P-201ENST00000365199 138 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 SNORA48.1-201ENST00000390879 135 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 SNORA26.3-201ENST00000391119 136 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 MIR208B-201ENST00000401172 77 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 AC123900.1-201ENST00000420390 96 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 MTCO2P3-201ENST00000442543 421 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 RNU7-14P-201ENST00000459331 62 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 AC130509.1-201ENST00000464158 433 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 RNU6-189P-201ENST00000516120 101 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 AC021231.3-201ENST00000558497 370 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 CYP4A27P-201ENST00000567218 190 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 AC092747.3-201ENST00000603769 301 ntBASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.58□□□□□ -2.16
NPIPA1Q9UND3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 CBX3P1-201ENST00000325243 554 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 RNU4-42P-201ENST00000364738 142 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 SNORD116-9-201ENST00000384000 95 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 SNORD116-3-201ENST00000384287 95 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 SNORD116-7-201ENST00000384404 95 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 SNORD116-5-201ENST00000384462 95 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 AP000275.1-201ENST00000411943 390 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 AC139712.2-201ENST00000424302 339 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 AC021146.2-201ENST00000504736 556 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 AC091133.4-201ENST00000511142 308 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 SNORA40.12-201ENST00000516329 111 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 RNU6-567P-201ENST00000516746 107 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 RNU6-323P-201ENST00000521915 107 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 AC104576.1-201ENST00000524225 88 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 AC090517.1-201ENST00000569307 266 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 MIR4498-201ENST00000577599 66 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 SNORA43.4-201ENST00000629559 138 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 MTND4P23-201ENST00000447723 1363 ntBASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
NPIPA1Q9UND3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 RNU6-1042P-201ENST00000384204 107 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 RNU6-1119P-201ENST00000384349 108 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 AL663109.1-201ENST00000411498 844 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 AC012306.1-201ENST00000423267 114 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 RNU6-1037P-201ENST00000459571 107 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 TOMM22P6-201ENST00000465035 409 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 RNU6-612P-201ENST00000516909 102 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 CENPUP1-201ENST00000526649 1202 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 AC025423.5-201ENST00000550230 219 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 AL118558.2-201ENST00000556294 238 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 AL357078.3-201ENST00000607528 618 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 AC064836.2-201ENST00000609491 462 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 AL121757.2-201ENST00000611223 313 ntBASIC1.56□□□□□ -2.16
NPIPA1Q9UND3 RNU6-661P-201ENST00000362409 107 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 Y_RNA.378-201ENST00000365652 113 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 SNORA69-201ENST00000383895 132 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 SNORA32.2-201ENST00000384049 122 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 U8.10-201ENST00000384260 133 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 SNORA12.2-201ENST00000391040 156 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 RNU4-62P-201ENST00000410125 130 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 RNA5SP100-201ENST00000410903 110 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 RNA5SP59-201ENST00000410922 110 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 VN1R36P-201ENST00000414936 291 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms