Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC005034.5-201ENST00000604219 466 ntBASIC1.96□□□□□ -2.1
NPC1L1Q9UHC9 AC124864.2-201ENST00000624736 186 ntBASIC1.96□□□□□ -2.1
NPC1L1Q9UHC9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC008555.8-201ENST00000623602 2168 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AP000648.3-201ENST00000623539 4507 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC092268.1-201ENST00000342691 405 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 RNU6-142P-201ENST00000384019 107 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 RNU6-43P-201ENST00000384302 107 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 RNA5SP219-201ENST00000390940 113 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 MTCO3P40-201ENST00000392516 676 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AL356432.1-201ENST00000405809 419 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 MIR1304-201ENST00000408243 91 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 Y_RNA.597-201ENST00000410463 100 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 RN7SKP61-201ENST00000410642 295 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 SRIP3-201ENST00000413200 219 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC007098.1-201ENST00000420122 367 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC096920.1-201ENST00000423991 241 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC244670.1-201ENST00000436879 112 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 HMGB1P35-201ENST00000503360 598 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 SNORA14.1-201ENST00000516113 141 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC233702.2-202ENST00000562547 291 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC015720.1-201ENST00000565251 277 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AL034555.1-201ENST00000604816 211 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AC005296.1-201ENST00000616145 209 ntBASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NPC1L1Q9UHC9 SNORA7.1-201ENST00000363750 139 ntBASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 MTCO2P3-201ENST00000442543 421 ntBASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 RPL23AP3-201ENST00000453844 468 ntBASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 TPTE2P5-203ENST00000458118 728 ntBASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 SNRPGP7-201ENST00000469016 106 ntBASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 AC016632.1-201ENST00000503994 196 ntBASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 AC087854.1-201ENST00000519706 414 ntBASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 CENPUP1-201ENST00000526649 1202 ntBASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 MIR5583-1-201ENST00000580941 59 ntBASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 AC243960.4-201ENST00000600532 288 ntBASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 SNORD98-201ENST00000636377 67 ntBASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NPC1L1Q9UHC9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 RNU6-944P-201ENST00000364023 107 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 RNU4-66P-201ENST00000365199 138 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 SNORA69-201ENST00000383895 132 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 RNU6-692P-201ENST00000384496 107 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 Y_RNA.559-201ENST00000384686 107 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 SNAP23P1-201ENST00000433229 246 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 AC105313.1-201ENST00000509121 353 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 RNU6-567P-201ENST00000516746 107 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 HSPE1P4-201ENST00000550617 308 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 TRAV32-201ENST00000553993 340 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 AC103996.1-201ENST00000555468 102 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 MIR4421-201ENST00000578133 69 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 AP000654.2-201ENST00000605633 586 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 AC004908.3-201ENST00000610248 625 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 AL132822.1-201ENST00000617063 513 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 AC103705.1-201ENST00000619013 241 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 AL359880.1-201ENST00000621879 266 ntBASIC1.93□□□□□ -2.1
NPC1L1Q9UHC9 Y_RNA.194-201ENST00000363985 102 ntBASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 RNY1P14-201ENST00000384426 108 ntBASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 USP9YP14-201ENST00000430663 563 ntBASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 AL353689.1-201ENST00000438895 199 ntBASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 MTND1P1-201ENST00000445453 368 ntBASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 RNU6-1037P-201ENST00000459571 107 ntBASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 Y_RNA.654-201ENST00000497848 106 ntBASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 Y_RNA.675-201ENST00000516389 149 ntBASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 AL161670.1-201ENST00000554348 137 ntBASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 AL773524.1-201ENST00000614065 229 ntBASIC1.92□□□□□ -2.1
NPC1L1Q9UHC9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 Y_RNA.381-201ENST00000365666 102 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 RNU2-48P-201ENST00000410694 191 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 AL590135.1-201ENST00000422215 156 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 AC019205.3-201ENST00000424573 156 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms