Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 DYNLT3P2-201ENST00000442517 295 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.95□□□□□ -2.26
VAPAQ9P0L0 PGBD4P5-201ENST00000445958 426 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 AC079781.2-201ENST00000446424 169 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.95□□□□□ -2.26
VAPAQ9P0L0 RNU7-182P-201ENST00000459009 62 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 MTCO2P6-201ENST00000463134 685 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 AC011406.1-201ENST00000512440 370 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 RNU6-856P-201ENST00000516959 98 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 RNA5SP503-201ENST00000517047 117 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.95□□□□□ -2.26
VAPAQ9P0L0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.95□□□□□ -2.26
VAPAQ9P0L0 TMF1P1-201ENST00000576058 373 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 MIR4709-201ENST00000577272 72 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.95□□□□□ -2.26
VAPAQ9P0L0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.95□□□□□ -2.26
VAPAQ9P0L0 MIR548AB-201ENST00000584917 84 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 RPL17P51-201ENST00000605218 238 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 AC022418.1-201ENST00000624118 445 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 RNU6-1029P-201ENST00000384109 107 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
VAPAQ9P0L0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.94□□□□□ -2.26
VAPAQ9P0L0 AP1B1P2-201ENST00000416196 106 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 AL593851.1-201ENST00000426171 157 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 ISCA1P6-201ENST00000427740 390 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 USP9YP14-201ENST00000430663 563 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 GPR143P-201ENST00000434155 205 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.94□□□□□ -2.26
VAPAQ9P0L0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.94□□□□□ -2.26
VAPAQ9P0L0 MTND2P39-201ENST00000457230 764 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 RPS29P15-201ENST00000458329 171 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 MTND2P14-201ENST00000482139 351 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 FABP5P5-201ENST00000515537 406 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.94□□□□□ -2.26
VAPAQ9P0L0 AL022161.1-201ENST00000604390 213 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 AC002044.1-201ENST00000606707 158 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 AC009994.1-201ENST00000606889 253 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 AC040896.1-201ENST00000613819 479 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.94□□□□□ -2.26
VAPAQ9P0L0 SEPT14P19-203ENST00000633205 211 ntBASIC0.94□□□□□ -2.26
VAPAQ9P0L0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
VAPAQ9P0L0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 RNA5SP259-201ENST00000365541 109 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 SNORA18.2-201ENST00000383865 132 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 RNU6-74P-201ENST00000384235 107 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 Y_RNA.480-201ENST00000384364 102 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 SNORD70.1-201ENST00000391007 85 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 RNU4-46P-201ENST00000410818 138 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.93□□□□□ -2.26
VAPAQ9P0L0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.93□□□□□ -2.26
VAPAQ9P0L0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.93□□□□□ -2.26
VAPAQ9P0L0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.93□□□□□ -2.26
VAPAQ9P0L0 Z73417.1-201ENST00000447373 778 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 RNU7-34P-201ENST00000459394 64 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 AC114982.1-201ENST00000469402 321 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.93□□□□□ -2.26
VAPAQ9P0L0 AC079382.1-201ENST00000493346 557 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 AC008628.2-201ENST00000502605 298 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.93□□□□□ -2.26
VAPAQ9P0L0 AP001836.1-201ENST00000604675 523 ntBASIC0.93□□□□□ -2.26
VAPAQ9P0L0 RNU6-434P-201ENST00000384376 107 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 MIR1-2-201ENST00000384961 85 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 RNU6-1093P-201ENST00000391194 107 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 AL356776.1-201ENST00000406574 447 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 RPS3AP3-201ENST00000411933 242 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 BTF3P4-201ENST00000418852 495 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 SNRPEP10-201ENST00000420249 274 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 AC011233.1-201ENST00000422812 283 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 AC012306.1-201ENST00000423267 114 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 HSPE1P13-201ENST00000451143 297 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 C1DP4-201ENST00000455429 424 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.92□□□□□ -2.26
VAPAQ9P0L0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.92□□□□□ -2.26
VAPAQ9P0L0 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 AC067942.3-201ENST00000512025 362 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 LRRC34P2-201ENST00000514850 553 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 RNU2-69P-201ENST00000516061 100 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 SNORA25.17-201ENST00000517184 124 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 AL442163.3-201ENST00000554110 156 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 MIR3664-201ENST00000579074 99 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 RSL24D1P11-201ENST00000591045 491 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 NIFKP6-201ENST00000598115 845 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 Z84480.1-201ENST00000605131 311 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 AC064807.4-201ENST00000607201 407 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 AC068647.2-201ENST00000637380 353 ntBASIC0.92□□□□□ -2.26
VAPAQ9P0L0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
VAPAQ9P0L0 SNORA25-201ENST00000384384 134 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 RPL23AP36-201ENST00000413895 458 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.91□□□□□ -2.26
VAPAQ9P0L0 HSFY7P-201ENST00000432672 318 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 HSFY8P-201ENST00000437934 318 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.91□□□□□ -2.26
VAPAQ9P0L0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.91□□□□□ -2.26
VAPAQ9P0L0 snoU13.23-201ENST00000458863 104 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.91□□□□□ -2.26
VAPAQ9P0L0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.91□□□□□ -2.26
VAPAQ9P0L0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms