Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 MTCO1P21-201ENST00000416634 589 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 ARL5AP1-201ENST00000418991 388 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 AL354695.1-201ENST00000427935 228 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 USP9YP28-201ENST00000435142 589 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC59Q9P031 HMGN2P9-201ENST00000476875 229 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 AC010486.2-201ENST00000505572 483 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 AC079140.3-201ENST00000511111 550 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 RPL39P5-202ENST00000512505 151 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 RNU6-902P-201ENST00000517212 91 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC59Q9P031 LRRC34P1-201ENST00000542742 915 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 AL391840.1-201ENST00000571144 367 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 AC009541.1-201ENST00000438279 2662 ntBASIC1.21□□□□□ -2.22
CCDC59Q9P031 RNU6-545P-201ENST00000362681 104 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 U8.1-201ENST00000362843 134 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 RNU1-96P-201ENST00000364163 162 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 RNU6-1019P-201ENST00000364424 107 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 SNORA18.2-201ENST00000383865 132 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 RNU6-1093P-201ENST00000391194 107 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.2□□□□□ -2.22
CCDC59Q9P031 FTH1P12-201ENST00000432137 551 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 MTCO2P3-201ENST00000442543 421 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 RNU7-63P-201ENST00000459054 62 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 RNU7-180P-201ENST00000459240 63 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 AC091435.1-201ENST00000505442 584 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CCDC59Q9P031 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC59Q9P031 RNU6-1041P-201ENST00000516254 102 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC59Q9P031 AC084364.2-201ENST00000546924 395 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC59Q9P031 AC090115.3-201ENST00000553218 849 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 CTHRC1P1-201ENST00000605383 469 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 MIR3976-201ENST00000606807 139 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 AC109347.2-201ENST00000610220 349 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 AC095038.3-201ENST00000634439 195 ntBASIC1.2□□□□□ -2.22
CCDC59Q9P031 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC59Q9P031 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
CCDC59Q9P031 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC59Q9P031 MIR449A-201ENST00000362113 91 ntBASIC1.19□□□□□ -2.22
CCDC59Q9P031 RNU6-1106P-201ENST00000390845 107 ntBASIC1.19□□□□□ -2.22
CCDC59Q9P031 RN7SKP142-201ENST00000411236 328 ntBASIC1.19□□□□□ -2.22
CCDC59Q9P031 SNRPGP13-201ENST00000442212 177 ntBASIC1.19□□□□□ -2.22
CCDC59Q9P031 snoU13.6-201ENST00000458785 104 ntBASIC1.19□□□□□ -2.22
CCDC59Q9P031 RNU7-138P-201ENST00000459479 64 ntBASIC1.19□□□□□ -2.22
CCDC59Q9P031 AC108078.1-201ENST00000508073 725 ntBASIC1.19□□□□□ -2.22
CCDC59Q9P031 RNU6-856P-201ENST00000516959 98 ntBASIC1.19□□□□□ -2.22
CCDC59Q9P031 MTCO2P4-201ENST00000517968 247 ntBASIC1.19□□□□□ -2.22
CCDC59Q9P031 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
CCDC59Q9P031 BNIP3P22-201ENST00000593399 556 ntBASIC1.19□□□□□ -2.22
CCDC59Q9P031 AL121890.5-201ENST00000620848 304 ntBASIC1.19□□□□□ -2.22
CCDC59Q9P031 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CCDC59Q9P031 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
CCDC59Q9P031 U8.2-201ENST00000363156 134 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 SNORA63D-201ENST00000364359 132 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 RNU6-996P-201ENST00000365438 107 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 RNU6-418P-201ENST00000384035 107 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 RNU6-203P-201ENST00000384038 104 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 AL117342.1-201ENST00000404861 406 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 AC090960.1-201ENST00000421072 306 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 RPS27P16-201ENST00000425758 201 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC59Q9P031 AL135790.2-201ENST00000437701 267 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC59Q9P031 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC59Q9P031 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC59Q9P031 AC079140.2-201ENST00000506193 142 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 CCDC34P1-201ENST00000507441 517 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 RNA5SP481-201ENST00000516814 122 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 SNORA31.24-201ENST00000517232 57 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 RNU6-323P-201ENST00000521915 107 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 DEFB131C-201ENST00000528817 165 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC59Q9P031 uc_338.34-201ENST00000617467 174 ntBASIC1.18□□□□□ -2.22
CCDC59Q9P031 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
CCDC59Q9P031 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.17□□□□□ -2.22
CCDC59Q9P031 RNU6-562P-201ENST00000362731 107 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 Y_RNA.255-201ENST00000364581 97 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 RNA5SP219-201ENST00000390940 113 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 AC060773.1-201ENST00000421698 310 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 AC027119.1-201ENST00000440877 241 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.17□□□□□ -2.22
CCDC59Q9P031 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC59Q9P031 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC59Q9P031 AC073415.1-201ENST00000449240 153 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 OR2AQ1P-201ENST00000451972 200 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 AC067942.3-201ENST00000512025 362 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 SNORA25.15-201ENST00000516487 89 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 RNU6-612P-201ENST00000516909 102 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 AC019176.1-201ENST00000518519 225 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 AC090821.2-201ENST00000523552 176 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 MTND4P7-201ENST00000523876 130 ntBASIC1.17□□□□□ -2.22
CCDC59Q9P031 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC59Q9P031 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms