Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MTND4P19-201ENST00000446659 478 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 RPL39P29-201ENST00000447779 157 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 AP001324.2-201ENST00000461163 319 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 RNU5B-3P-201ENST00000516601 115 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 HSPE1P4-201ENST00000550617 308 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 SUB1P3-201ENST00000564581 315 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 MIR1244-1-201ENST00000612829 85 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 MIR1244-3-201ENST00000635744 85 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 MIR1244-2-201ENST00000636449 85 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 MIR1244-4-202ENST00000636813 85 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 Y_RNA.162-201ENST00000363683 102 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 U3.13-201ENST00000364804 214 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 Y_RNA.428-201ENST00000384078 102 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 Y_RNA.504-201ENST00000384481 104 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 MIR27B-201ENST00000385129 97 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 RNA5SP390-201ENST00000410191 113 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 RNA5SP494-201ENST00000410653 129 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 MTCO3P29-201ENST00000432119 779 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 Z82188.1-201ENST00000436709 154 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 RPL30P1-201ENST00000488676 339 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 AC107222.1-201ENST00000510899 637 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 SNORA25.11-201ENST00000515935 105 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 SNORD116.3-201ENST00000517176 78 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-988P-201ENST00000519081 107 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 AL360085.1-201ENST00000604713 532 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 AC083806.3-201ENST00000614016 455 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 AC091925.1-201ENST00000623204 462 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 SNORA43.4-201ENST00000629559 138 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 AC233981.2-201ENST00000611524 1614 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 HAUS6P2-201ENST00000433254 2404 ntBASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.49□□□□□ -2.01
SMARCAL1Q9NZC9 Y_RNA.80-201ENST00000362996 102 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-461P-201ENST00000364195 107 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 Y_RNA.314-201ENST00000365114 102 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-487P-201ENST00000365430 104 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-968P-201ENST00000384076 107 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 SNORA36A-201ENST00000384221 132 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 Y_RNA.485-201ENST00000384395 102 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 SNORA80E-201ENST00000384744 137 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 MIR606-201ENST00000384851 96 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 AC138623.1-201ENST00000418060 216 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 RPL23AP95-201ENST00000426806 265 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 AC096644.2-201ENST00000429278 159 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 AL445687.1-201ENST00000439946 251 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 AL513328.1-201ENST00000446460 224 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 MRPS36P2-201ENST00000512569 299 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 SNORA31.6-201ENST00000516241 130 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-1137P-201ENST00000517073 99 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 MIR5701-3-201ENST00000578890 82 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 MIR4513-201ENST00000581077 86 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 MIR5701-1-201ENST00000585138 82 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 RPS15AP11-201ENST00000594193 385 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 AC092447.9-201ENST00000603395 144 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 MIR6817-201ENST00000615588 66 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 MIR5701-2-201ENST00000615634 82 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 ZNF72P-201ENST00000425869 1908 ntBASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-529P-201ENST00000363383 104 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 RNA5SP68-201ENST00000363885 119 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-1141P-201ENST00000364520 107 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-1222P-201ENST00000384615 107 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 Y_RNA.577-201ENST00000384794 101 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AL358075.3-201ENST00000426289 226 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AC092423.1-201ENST00000430165 186 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 CHEK2P4-201ENST00000450340 246 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AL513124.1-201ENST00000450410 614 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AL441985.1-201ENST00000457727 251 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AC112771.1-201ENST00000463581 102 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AC104564.1-201ENST00000493028 407 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AC021146.2-201ENST00000504736 556 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AC026436.1-201ENST00000510537 270 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 SCARNA17.1-201ENST00000516211 143 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 SCARNA17.2-201ENST00000516334 143 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 RNU1-104P-201ENST00000517280 175 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 COX6CP5-201ENST00000527162 228 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AL590705.4-201ENST00000532209 134 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms