Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TMEM39AQ9NV64 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TMEM39AQ9NV64 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.94□□□□□ -1.78
TMEM39AQ9NV64 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 RNU4-80P-201ENST00000363200 141 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 RNU6-727P-201ENST00000363592 107 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 Y_RNA.170-201ENST00000363746 110 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 AL138878.1-201ENST00000405131 347 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 MIR320B2-201ENST00000408479 138 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 RNA5SP306-201ENST00000411087 107 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 CYCSP48-201ENST00000417124 323 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 AC024067.1-201ENST00000426199 223 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 IFNA11P-201ENST00000446352 526 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 AL121594.1-201ENST00000475906 575 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 RPL31P61-201ENST00000496160 376 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 AC025554.1-201ENST00000505641 188 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 PHBP14-201ENST00000512887 367 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 EIF4BP1-201ENST00000554881 351 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 MIR3923-201ENST00000579521 83 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 LARP7P3-201ENST00000579888 337 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 MIR3145-201ENST00000580727 82 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 CEP170P1-201ENST00000502249 4587 ntBASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.93□□□□□ -1.78
TMEM39AQ9NV64 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 RNA5SP374-201ENST00000362939 125 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 Y_RNA.240-201ENST00000364469 95 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 RNU6-1310P-201ENST00000384153 107 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 CBX3P9-201ENST00000402326 552 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 MIR1289-1-201ENST00000408836 144 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 AC006028.1-201ENST00000438379 402 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 AL714022.1-201ENST00000439897 151 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 U3.44-201ENST00000458938 192 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 AC091021.1-201ENST00000468051 388 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 RN7SL504P-201ENST00000494496 287 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 RNU6-191P-201ENST00000516295 94 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 RNU6-155P-201ENST00000516347 100 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 SNORD19.2-201ENST00000516978 73 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 MIR5680-201ENST00000577577 84 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 SNRPGP20-201ENST00000604477 205 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 AC005520.5-201ENST00000613926 164 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 AC132825.6-201ENST00000638861 357 ntBASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TMEM39AQ9NV64 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 RNU1-62P-201ENST00000362599 164 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 SNORA18.3-201ENST00000384122 132 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 RNU6-748P-201ENST00000384648 107 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 RNU2-49P-201ENST00000410666 184 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 COTL1P1-201ENST00000422309 375 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 AC103975.1-201ENST00000482506 483 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 AC093663.1-201ENST00000497190 394 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 MIR2114-201ENST00000516645 80 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 AP005660.1-201ENST00000522972 293 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 MRPS18CP4-201ENST00000535821 231 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 RPS15AP11-201ENST00000594193 385 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 AL034555.1-201ENST00000604816 211 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 AC110741.2-201ENST00000605278 268 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 AL162274.2-201ENST00000614406 332 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 AF117829.1-206ENST00000621883 3802 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 FAM35DP-201ENST00000323387 2712 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 UBE3AP2-201ENST00000429033 2259 ntBASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.91□□□□□ -1.78
TMEM39AQ9NV64 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
TMEM39AQ9NV64 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
TMEM39AQ9NV64 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.9□□□□□ -1.78
TMEM39AQ9NV64 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TMEM39AQ9NV64 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.9□□□□□ -1.78
TMEM39AQ9NV64 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TMEM39AQ9NV64 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 RNU6-529P-201ENST00000363383 104 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 Y_RNA.262-201ENST00000364641 102 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 RNU6-1199P-201ENST00000411249 104 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 AL606753.1-201ENST00000427435 87 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 TMSB4XP3-201ENST00000445144 114 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 AC010099.1-201ENST00000455434 375 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 AL441985.1-201ENST00000457727 251 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.9□□□□□ -1.79
TMEM39AQ9NV64 MIR4308-201ENST00000580634 81 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms