Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 SNRPGP19-201ENST00000603826 189 ntBASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 MIR340-201ENST00000362125 95 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-623P-201ENST00000363143 105 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 SNORA32.2-201ENST00000384049 122 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 SNORA48.1-201ENST00000390879 135 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 MIR450B-201ENST00000401182 78 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 AL590002.1-201ENST00000406554 418 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 RNU4-26P-201ENST00000410270 107 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-325P-201ENST00000411132 105 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 RN7SKP192-201ENST00000411291 327 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 TOMM22P6-201ENST00000465035 409 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 Y_RNA.665-201ENST00000516177 98 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 RNA5SP364-201ENST00000516938 78 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 AC022254.1-201ENST00000567857 235 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 CPDP1-201ENST00000579660 283 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 MIR3935-201ENST00000583472 104 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 AC104458.1-201ENST00000608243 463 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 AF250324.2-201ENST00000608299 610 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 RMST_6.1-201ENST00000611980 203 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-451P-201ENST00000362921 107 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 RNU5B-2P-201ENST00000363036 113 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-254P-201ENST00000363377 107 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 SNORD31B-201ENST00000364977 69 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 SNORA29-201ENST00000384183 140 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 RNU2-2P-201ENST00000410396 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 RNU2-20P-201ENST00000410425 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 AL030996.1-201ENST00000411430 235 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 SNRPEP8-201ENST00000442866 260 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 MTCO2P7-201ENST00000446518 666 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 MTCO1P29-201ENST00000496868 288 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-314P-201ENST00000516574 104 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 RNU5F-4P-201ENST00000516581 114 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 RNU2-44P-201ENST00000516795 194 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.15-201ENST00000611544 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.16-201ENST00000613119 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.12-201ENST00000613778 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.20-201ENST00000613956 192 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.9-201ENST00000615427 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.11-201ENST00000616345 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.2-201ENST00000616535 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.3-201ENST00000617785 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.19-201ENST00000618602 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 RNU2-1-201ENST00000618664 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.6-201ENST00000619225 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.5-201ENST00000619465 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 U2.10-201ENST00000620268 191 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 uc_338.20-201ENST00000621563 178 ntBASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.8□□□□□ -2.12
ZCCHC3Q9NUD5 CBX3P1-201ENST00000325243 554 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 Y_RNA.38-201ENST00000362617 102 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 Y_RNA.256-201ENST00000364594 104 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-438P-201ENST00000365561 103 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-1286P-201ENST00000383871 107 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-128P-201ENST00000383976 107 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 MIR181A1-201ENST00000385026 110 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 SNORA12.2-201ENST00000391040 156 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-1093P-201ENST00000391194 107 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 Y_RNA.615-201ENST00000410769 117 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 AC009310.1-201ENST00000414414 451 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 SNRPEP10-201ENST00000420249 274 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 USP9YP28-201ENST00000435142 589 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 NDUFA5P4-201ENST00000436704 385 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 snoU13.6-201ENST00000458785 104 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 RNU7-14P-201ENST00000459331 62 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 HMGN2P26-201ENST00000463169 339 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 AC026371.1-201ENST00000551867 419 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 AC090517.1-201ENST00000569307 266 ntBASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZCCHC3Q9NUD5 Y_RNA.123-201ENST00000363338 102 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 SNORD113-7-201ENST00000363762 77 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AL356432.1-201ENST00000405809 419 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 RPS26P42-201ENST00000413485 326 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms