Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 RNU6-550P-201ENST00000391057 101 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 RNU2-8P-201ENST00000410727 190 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 USP9YP14-201ENST00000430663 563 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 USP9YP28-201ENST00000435142 589 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 USP9YP12-201ENST00000450481 570 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 AK3P2-201ENST00000507976 429 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 RNA5SP384-201ENST00000516615 116 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 AC136932.1-201ENST00000574771 208 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 AC007671.2-201ENST00000637344 619 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 SNORD32A-201ENST00000364805 84 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 RN7SKP61-201ENST00000410642 295 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AC060773.1-201ENST00000421698 310 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AL356583.2-201ENST00000426536 280 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AL512286.1-201ENST00000439244 400 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AC016632.1-201ENST00000503994 196 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AC034244.1-201ENST00000507687 207 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AC011406.1-201ENST00000512440 370 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 RNA5SP102-201ENST00000516865 106 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 CBX3P8-201ENST00000532412 525 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AL442163.3-201ENST00000554110 156 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 VN1R107P-201ENST00000601784 209 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AC112191.3-201ENST00000604371 277 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 Z98751.3-201ENST00000604447 521 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 Z99289.3-201ENST00000605586 594 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AL022345.2-201ENST00000606307 135 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AC138749.5-201ENST00000611461 208 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AC008250.2-201ENST00000615261 205 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AC116165.2-201ENST00000616705 206 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 AP002371.2-201ENST00000624450 503 ntBASIC0.78□□□□□ -2.28
UBQLN4Q9NRR5 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 RNU5E-5P-201ENST00000365379 116 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 SNORA18.2-201ENST00000383865 132 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 SNORA36A-201ENST00000384221 132 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 RNU11-5P-201ENST00000391216 129 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AL117342.1-201ENST00000404861 406 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC002486.1-201ENST00000435098 391 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC104850.1-201ENST00000435940 476 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AL162395.1-201ENST00000457882 422 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 MTCO3P7-201ENST00000510008 774 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC091874.1-201ENST00000511402 339 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 CYCSP23-201ENST00000519781 313 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC103996.1-201ENST00000555468 102 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 CYP4A27P-201ENST00000567218 190 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 TMF1P1-201ENST00000576058 373 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 MIR3664-201ENST00000579074 99 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 MIR4781-201ENST00000585250 76 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC091805.2-201ENST00000603848 235 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AL391646.1-201ENST00000603860 190 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 CTHRC1P1-201ENST00000605383 469 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC012676.2-201ENST00000619258 186 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC138649.3-201ENST00000622154 254 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC027335.2-201ENST00000624030 375 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AC006927.3-201ENST00000638789 384 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 AL391516.1-201ENST00000554380 2449 ntBASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
UBQLN4Q9NRR5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 PRPS1P1-201ENST00000445305 876 ntBASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 C1DP4-201ENST00000455429 424 ntBASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 RN7SKP265-201ENST00000516448 223 ntBASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 RNU6-856P-201ENST00000516959 98 ntBASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 SUMO2P16-201ENST00000519475 264 ntBASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 MIR3973-201ENST00000579824 107 ntBASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 TUSC7.1-201ENST00000610969 165 ntBASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 AC011155.2-201ENST00000623202 216 ntBASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
UBQLN4Q9NRR5 RNU1-76P-201ENST00000362903 159 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 RNU6-169P-201ENST00000365336 107 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 RNU6-827P-201ENST00000365553 106 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 MIR513B-201ENST00000385136 84 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 SSR1P2-201ENST00000415208 787 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AC098592.1-201ENST00000419352 333 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 ISCA1P6-201ENST00000427740 390 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AL133396.1-201ENST00000432048 687 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 SNAP23P1-201ENST00000433229 246 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms