Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
HPS4Q9NQG7 RNY4P14-201ENST00000363656 96 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 Y_RNA.256-201ENST00000364594 104 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 MIR514A2-201ENST00000385131 88 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 MIR514A3-201ENST00000385132 88 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 MIR1262-201ENST00000408276 93 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 FCF1P9-201ENST00000412546 282 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 ZNF885P-201ENST00000420174 1098 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 AC108667.1-201ENST00000428618 249 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.93□□□□□ -2.1
HPS4Q9NQG7 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.93□□□□□ -2.1
HPS4Q9NQG7 RPL23AP6-201ENST00000446637 472 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.93□□□□□ -2.1
HPS4Q9NQG7 RN7SKP210-201ENST00000459176 261 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 RNU7-138P-201ENST00000459479 64 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 AC092989.1-201ENST00000481235 277 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 RPS29P11-201ENST00000496507 171 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 CENPUP1-201ENST00000526649 1202 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 AC109635.3-201ENST00000529536 185 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.93□□□□□ -2.1
HPS4Q9NQG7 MIR3136-201ENST00000583498 78 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.93□□□□□ -2.1
HPS4Q9NQG7 RMST_3.1-201ENST00000611651 109 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 AL359314.1-201ENST00000616913 261 ntBASIC1.93□□□□□ -2.1
HPS4Q9NQG7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HPS4Q9NQG7 OR4G1P-203ENST00000641984 1631 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AP000560.1-201ENST00000624150 1937 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 Y_RNA.89-201ENST00000363031 102 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 SNORD115-3-201ENST00000363100 82 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 RNY3P3-201ENST00000363816 102 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 RNU6-82P-201ENST00000363970 107 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 RNU6-743P-201ENST00000364151 106 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 RNU6-534P-201ENST00000364877 106 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 RNU6-142P-201ENST00000384019 107 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 SNORD73A-201ENST00000386062 65 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 RNA5SP450-201ENST00000411206 102 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.92□□□□□ -2.1
HPS4Q9NQG7 EIF1AXP1-201ENST00000419267 435 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC244636.1-201ENST00000421152 228 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AL590135.1-201ENST00000422215 156 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC096920.1-201ENST00000423991 241 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC019205.3-201ENST00000424573 156 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC078809.1-201ENST00000427601 140 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 MTND2P29-201ENST00000438595 412 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC016700.2-201ENST00000446011 156 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC015911.1-201ENST00000495111 156 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 RNU6-189P-201ENST00000516120 101 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.92□□□□□ -2.1
HPS4Q9NQG7 HSPE1P4-201ENST00000550617 308 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AL356157.2-201ENST00000605122 111 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC016727.1-205ENST00000605437 569 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AL773524.1-201ENST00000614065 229 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.92□□□□□ -2.1
HPS4Q9NQG7 MIR1248-201ENST00000629190 106 ntBASIC1.92□□□□□ -2.1
HPS4Q9NQG7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.92□□□□□ -2.1
HPS4Q9NQG7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HPS4Q9NQG7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
HPS4Q9NQG7 AC009487.4-201ENST00000624969 3585 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 Y_RNA.167-201ENST00000363735 109 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 Y_RNA.231-201ENST00000364358 102 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 RNA5SP190-201ENST00000365222 118 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 RN7SKP61-201ENST00000410642 295 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 POLHP1-201ENST00000411806 470 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 RPL31P63-201ENST00000422565 375 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 RPL23AP95-201ENST00000426806 265 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.91□□□□□ -2.1
HPS4Q9NQG7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.91□□□□□ -2.1
HPS4Q9NQG7 SNORD13-201ENST00000459299 104 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 AC145146.1-201ENST00000496370 254 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 PTP4A1P4-201ENST00000512479 322 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 SNORA31.16-201ENST00000516773 139 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 MTND4LP26-201ENST00000518144 282 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 GNAI2P1-201ENST00000541815 315 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 TRAV32-201ENST00000553993 340 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.91□□□□□ -2.1
HPS4Q9NQG7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.91□□□□□ -2.1
HPS4Q9NQG7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.91□□□□□ -2.1
HPS4Q9NQG7 MIR3683-201ENST00000580847 82 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 AC092747.3-201ENST00000603769 301 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 RNU6-89P-201ENST00000606519 100 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 AC092807.2-201ENST00000609367 243 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 AC103705.1-201ENST00000619013 241 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 AC024614.3-201ENST00000637860 256 ntBASIC1.91□□□□□ -2.1
HPS4Q9NQG7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HPS4Q9NQG7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
HPS4Q9NQG7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HPS4Q9NQG7 RNU6-522P-201ENST00000364497 107 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.453-201ENST00000384223 109 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 SNORA12-201ENST00000391162 147 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 AL627390.1-201ENST00000396055 340 ntBASIC1.9□□□□□ -2.11
HPS4Q9NQG7 MIR1294-201ENST00000408503 142 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms